Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
VGLL1Q99990 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13.72□□□□□ -0.21
VGLL1Q99990 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
VGLL1Q99990 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
VGLL1Q99990 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VGLL1Q99990 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VGLL1Q99990 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
VGLL1Q99990 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VGLL1Q99990 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
VGLL1Q99990 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
VGLL1Q99990 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
VGLL1Q99990 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VGLL1Q99990 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
VGLL1Q99990 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VGLL1Q99990 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VGLL1Q99990 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
VGLL1Q99990 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC13.72□□□□□ -0.21
VGLL1Q99990 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
VGLL1Q99990 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC13.72□□□□□ -0.21
VGLL1Q99990 AC097488.1-201ENST00000507834 756 ntBASIC13.72□□□□□ -0.21
VGLL1Q99990 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.72□□□□□ -0.21
VGLL1Q99990 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.72□□□□□ -0.21
VGLL1Q99990 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.72□□□□□ -0.21
VGLL1Q99990 MIR3180-5-201ENST00000583743 153 ntBASIC13.72□□□□□ -0.21
VGLL1Q99990 AL359736.2-201ENST00000621992 437 ntBASIC13.72□□□□□ -0.21
VGLL1Q99990 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VGLL1Q99990 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VGLL1Q99990 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
VGLL1Q99990 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VGLL1Q99990 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
VGLL1Q99990 AC009102.3-201ENST00000623118 1491 ntBASIC13.72□□□□□ -0.21
VGLL1Q99990 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VGLL1Q99990 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
VGLL1Q99990 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.72□□□□□ -0.21
VGLL1Q99990 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VGLL1Q99990 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.72□□□□□ -0.21
VGLL1Q99990 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VGLL1Q99990 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VGLL1Q99990 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
VGLL1Q99990 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
VGLL1Q99990 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
VGLL1Q99990 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
VGLL1Q99990 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VGLL1Q99990 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.71□□□□□ -0.21
VGLL1Q99990 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
VGLL1Q99990 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
VGLL1Q99990 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VGLL1Q99990 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC13.71□□□□□ -0.21
VGLL1Q99990 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VGLL1Q99990 AC036111.1-201ENST00000533973 1582 ntBASIC13.71□□□□□ -0.21
VGLL1Q99990 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
VGLL1Q99990 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
VGLL1Q99990 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
VGLL1Q99990 CYP51A1P1-201ENST00000492267 1507 ntBASIC13.71□□□□□ -0.21
VGLL1Q99990 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VGLL1Q99990 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VGLL1Q99990 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VGLL1Q99990 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
VGLL1Q99990 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VGLL1Q99990 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VGLL1Q99990 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VGLL1Q99990 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VGLL1Q99990 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VGLL1Q99990 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.71□□□□□ -0.21
VGLL1Q99990 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC13.71□□□□□ -0.21
VGLL1Q99990 FAM201B-201ENST00000458407 597 ntBASIC13.71□□□□□ -0.21
VGLL1Q99990 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC13.71□□□□□ -0.21
VGLL1Q99990 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.71□□□□□ -0.21
VGLL1Q99990 DGCR10-201ENST00000609839 495 ntBASIC13.71□□□□□ -0.21
VGLL1Q99990 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VGLL1Q99990 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC13.71□□□□□ -0.21
VGLL1Q99990 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
VGLL1Q99990 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
VGLL1Q99990 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VGLL1Q99990 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VGLL1Q99990 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
VGLL1Q99990 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
VGLL1Q99990 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
VGLL1Q99990 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
VGLL1Q99990 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.71□□□□□ -0.22
VGLL1Q99990 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VGLL1Q99990 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
VGLL1Q99990 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.71□□□□□ -0.22
VGLL1Q99990 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.71□□□□□ -0.22
VGLL1Q99990 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
VGLL1Q99990 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
VGLL1Q99990 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
VGLL1Q99990 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
VGLL1Q99990 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC13.71□□□□□ -0.22
VGLL1Q99990 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.71□□□□□ -0.22
VGLL1Q99990 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VGLL1Q99990 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
VGLL1Q99990 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13.7□□□□□ -0.22
VGLL1Q99990 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
VGLL1Q99990 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VGLL1Q99990 AL356309.3-201ENST00000624132 1934 ntBASIC13.7□□□□□ -0.22
VGLL1Q99990 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VGLL1Q99990 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VGLL1Q99990 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.7□□□□□ -0.22
VGLL1Q99990 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms