Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
LITAFQ99732 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
LITAFQ99732 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC12.02□□□□□ -0.49
LITAFQ99732 AC006449.5-201ENST00000610658 2098 ntBASIC12.02□□□□□ -0.49
LITAFQ99732 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
LITAFQ99732 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
LITAFQ99732 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LITAFQ99732 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LITAFQ99732 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LITAFQ99732 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LITAFQ99732 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
LITAFQ99732 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LITAFQ99732 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC12.02□□□□□ -0.49
LITAFQ99732 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LITAFQ99732 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.01□□□□□ -0.49
LITAFQ99732 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LITAFQ99732 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LITAFQ99732 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
LITAFQ99732 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
LITAFQ99732 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LITAFQ99732 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LITAFQ99732 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LITAFQ99732 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LITAFQ99732 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LITAFQ99732 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC12.01□□□□□ -0.49
LITAFQ99732 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LITAFQ99732 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
LITAFQ99732 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LITAFQ99732 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
LITAFQ99732 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
LITAFQ99732 MIR564-202ENST00000385049 94 ntBASIC12.01□□□□□ -0.49
LITAFQ99732 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
LITAFQ99732 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC12.01□□□□□ -0.49
LITAFQ99732 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC12.01□□□□□ -0.49
LITAFQ99732 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LITAFQ99732 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LITAFQ99732 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LITAFQ99732 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC12.01□□□□□ -0.49
LITAFQ99732 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
LITAFQ99732 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
LITAFQ99732 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LITAFQ99732 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC12.01□□□□□ -0.49
LITAFQ99732 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
LITAFQ99732 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
LITAFQ99732 CES3-203ENST00000543856 3178 ntTSL 2 BASIC12.01□□□□□ -0.49
LITAFQ99732 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC12.01□□□□□ -0.49
LITAFQ99732 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC12.01□□□□□ -0.49
LITAFQ99732 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
LITAFQ99732 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LITAFQ99732 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LITAFQ99732 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC12□□□□□ -0.49
LITAFQ99732 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC12□□□□□ -0.49
LITAFQ99732 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC12□□□□□ -0.49
LITAFQ99732 AC022188.1-201ENST00000620960 1664 ntBASIC12□□□□□ -0.49
LITAFQ99732 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
LITAFQ99732 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC12□□□□□ -0.49
LITAFQ99732 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
LITAFQ99732 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC12□□□□□ -0.49
LITAFQ99732 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
LITAFQ99732 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
LITAFQ99732 AC005915.1-201ENST00000624912 2018 ntBASIC12□□□□□ -0.49
LITAFQ99732 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
LITAFQ99732 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC12□□□□□ -0.49
LITAFQ99732 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
LITAFQ99732 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC12□□□□□ -0.49
LITAFQ99732 OR2A1-AS1-201ENST00000462305 773 ntBASIC12□□□□□ -0.49
LITAFQ99732 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC12□□□□□ -0.49
LITAFQ99732 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC12□□□□□ -0.49
LITAFQ99732 AC120498.8-201ENST00000614275 531 ntBASIC12□□□□□ -0.49
LITAFQ99732 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
LITAFQ99732 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
LITAFQ99732 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 AC009102.3-201ENST00000623118 1491 ntBASIC12□□□□□ -0.49
LITAFQ99732 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
LITAFQ99732 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LITAFQ99732 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC12□□□□□ -0.49
LITAFQ99732 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms