Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PHOX2BQ99453 AL356309.3-201ENST00000624132 1934 ntBASIC18.23■□□□□ 0.51
PHOX2BQ99453 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHOX2BQ99453 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.23■□□□□ 0.51
PHOX2BQ99453 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
PHOX2BQ99453 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHOX2BQ99453 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHOX2BQ99453 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.23■□□□□ 0.51
PHOX2BQ99453 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.23■□□□□ 0.51
PHOX2BQ99453 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
PHOX2BQ99453 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHOX2BQ99453 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PHOX2BQ99453 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.23■□□□□ 0.51
PHOX2BQ99453 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PHOX2BQ99453 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PHOX2BQ99453 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.23■□□□□ 0.51
PHOX2BQ99453 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHOX2BQ99453 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.23■□□□□ 0.51
PHOX2BQ99453 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.23■□□□□ 0.51
PHOX2BQ99453 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.23■□□□□ 0.51
PHOX2BQ99453 AC005225.4-201ENST00000557330 545 ntBASIC18.23■□□□□ 0.51
PHOX2BQ99453 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.23■□□□□ 0.51
PHOX2BQ99453 C20orf181-201ENST00000623918 480 ntBASIC18.23■□□□□ 0.51
PHOX2BQ99453 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
PHOX2BQ99453 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PHOX2BQ99453 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHOX2BQ99453 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.23■□□□□ 0.51
PHOX2BQ99453 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.23■□□□□ 0.51
PHOX2BQ99453 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PHOX2BQ99453 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PHOX2BQ99453 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PHOX2BQ99453 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.22■□□□□ 0.51
PHOX2BQ99453 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PHOX2BQ99453 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PHOX2BQ99453 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PHOX2BQ99453 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.22■□□□□ 0.51
PHOX2BQ99453 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PHOX2BQ99453 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
PHOX2BQ99453 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
PHOX2BQ99453 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.22■□□□□ 0.51
PHOX2BQ99453 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PHOX2BQ99453 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.22■□□□□ 0.51
PHOX2BQ99453 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.22■□□□□ 0.51
PHOX2BQ99453 CEND1P1-201ENST00000451006 455 ntBASIC18.22■□□□□ 0.51
PHOX2BQ99453 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.22■□□□□ 0.51
PHOX2BQ99453 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PHOX2BQ99453 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.22■□□□□ 0.51
PHOX2BQ99453 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.22■□□□□ 0.51
PHOX2BQ99453 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PHOX2BQ99453 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PHOX2BQ99453 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PHOX2BQ99453 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PHOX2BQ99453 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PHOX2BQ99453 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.22■□□□□ 0.51
PHOX2BQ99453 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PHOX2BQ99453 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PHOX2BQ99453 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PHOX2BQ99453 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.21■□□□□ 0.51
PHOX2BQ99453 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PHOX2BQ99453 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
PHOX2BQ99453 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PHOX2BQ99453 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PHOX2BQ99453 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PHOX2BQ99453 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.21■□□□□ 0.51
PHOX2BQ99453 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PHOX2BQ99453 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PHOX2BQ99453 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PHOX2BQ99453 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PHOX2BQ99453 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.21■□□□□ 0.51
PHOX2BQ99453 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PHOX2BQ99453 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PHOX2BQ99453 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PHOX2BQ99453 MRPL20P1-201ENST00000400819 433 ntBASIC18.21■□□□□ 0.51
PHOX2BQ99453 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.21■□□□□ 0.51
PHOX2BQ99453 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.21■□□□□ 0.51
PHOX2BQ99453 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PHOX2BQ99453 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.21■□□□□ 0.51
PHOX2BQ99453 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.21■□□□□ 0.51
PHOX2BQ99453 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.21■□□□□ 0.51
PHOX2BQ99453 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.21■□□□□ 0.51
PHOX2BQ99453 Z92544.3-201ENST00000624747 417 ntBASIC18.21■□□□□ 0.51
PHOX2BQ99453 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.21■□□□□ 0.51
PHOX2BQ99453 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PHOX2BQ99453 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PHOX2BQ99453 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PHOX2BQ99453 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.21■□□□□ 0.51
PHOX2BQ99453 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PHOX2BQ99453 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PHOX2BQ99453 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.21■□□□□ 0.51
PHOX2BQ99453 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PHOX2BQ99453 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
PHOX2BQ99453 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PHOX2BQ99453 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PHOX2BQ99453 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PHOX2BQ99453 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PHOX2BQ99453 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PHOX2BQ99453 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PHOX2BQ99453 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PHOX2BQ99453 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PHOX2BQ99453 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms