Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC114341.1-201ENST00000618070 349 ntBASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 AC125634.1-201ENST00000438758 1403 ntBASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 AC096582.2-201ENST00000510860 516 ntBASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 BNIP3P18-201ENST00000593976 575 ntBASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 AC097374.2-201ENST00000618617 1306 ntBASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP1Q96SZ6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 AC004408.2-201ENST00000623613 2777 ntBASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 AC004870.1-201ENST00000315132 882 ntBASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 NUS1P2-201ENST00000417358 873 ntBASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 FAAHP1-202ENST00000446499 1238 ntBASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP1Q96SZ6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 IFNL4P1-201ENST00000607083 540 ntBASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 AL732292.2-201ENST00000609649 430 ntBASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms