Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NEK1Q96PY6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NEK1Q96PY6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.4■■□□□ 1.02
NEK1Q96PY6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NEK1Q96PY6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NEK1Q96PY6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
NEK1Q96PY6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NEK1Q96PY6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.4■■□□□ 1.02
NEK1Q96PY6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
NEK1Q96PY6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NEK1Q96PY6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NEK1Q96PY6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
NEK1Q96PY6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.39■■□□□ 1.02
NEK1Q96PY6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
NEK1Q96PY6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NEK1Q96PY6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NEK1Q96PY6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
NEK1Q96PY6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.39■■□□□ 1.01
NEK1Q96PY6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NEK1Q96PY6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
NEK1Q96PY6 AC022616.7-201ENST00000525383 220 ntBASIC21.39■■□□□ 1.01
NEK1Q96PY6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.39■■□□□ 1.01
NEK1Q96PY6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.39■■□□□ 1.01
NEK1Q96PY6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.01
NEK1Q96PY6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NEK1Q96PY6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NEK1Q96PY6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NEK1Q96PY6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NEK1Q96PY6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NEK1Q96PY6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NEK1Q96PY6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
NEK1Q96PY6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.39■■□□□ 1.01
NEK1Q96PY6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
NEK1Q96PY6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
NEK1Q96PY6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NEK1Q96PY6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NEK1Q96PY6 LINC01311-201ENST00000565162 1445 ntBASIC21.38■■□□□ 1.01
NEK1Q96PY6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.38■■□□□ 1.01
NEK1Q96PY6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NEK1Q96PY6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NEK1Q96PY6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.38■■□□□ 1.01
NEK1Q96PY6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NEK1Q96PY6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NEK1Q96PY6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NEK1Q96PY6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NEK1Q96PY6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.38■■□□□ 1.01
NEK1Q96PY6 AC004263.2-201ENST00000617183 678 ntBASIC21.38■■□□□ 1.01
NEK1Q96PY6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NEK1Q96PY6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NEK1Q96PY6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
NEK1Q96PY6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NEK1Q96PY6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NEK1Q96PY6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
NEK1Q96PY6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NEK1Q96PY6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.37■■□□□ 1.01
NEK1Q96PY6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
NEK1Q96PY6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
NEK1Q96PY6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
NEK1Q96PY6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.37■■□□□ 1.01
NEK1Q96PY6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.37■■□□□ 1.01
NEK1Q96PY6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NEK1Q96PY6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
NEK1Q96PY6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NEK1Q96PY6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NEK1Q96PY6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
NEK1Q96PY6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NEK1Q96PY6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NEK1Q96PY6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NEK1Q96PY6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.37■■□□□ 1.01
NEK1Q96PY6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.37■■□□□ 1.01
NEK1Q96PY6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.37■■□□□ 1.01
NEK1Q96PY6 VENTXP5-201ENST00000523979 775 ntBASIC21.37■■□□□ 1.01
NEK1Q96PY6 ZNF444P1-201ENST00000559497 298 ntBASIC21.37■■□□□ 1.01
NEK1Q96PY6 AL049597.2-201ENST00000565575 961 ntBASIC21.37■■□□□ 1.01
NEK1Q96PY6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.37■■□□□ 1.01
NEK1Q96PY6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.37■■□□□ 1.01
NEK1Q96PY6 AL590326.2-201ENST00000625139 305 ntBASIC21.37■■□□□ 1.01
NEK1Q96PY6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
NEK1Q96PY6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NEK1Q96PY6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NEK1Q96PY6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NEK1Q96PY6 AC100803.2-201ENST00000562459 1963 ntBASIC21.37■■□□□ 1.01
NEK1Q96PY6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
NEK1Q96PY6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NEK1Q96PY6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.37■■□□□ 1.01
NEK1Q96PY6 PCDHB18P-201ENST00000524813 2368 ntBASIC21.37■■□□□ 1.01
NEK1Q96PY6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NEK1Q96PY6 AC012317.2-201ENST00000623305 2251 ntBASIC21.36■■□□□ 1.01
NEK1Q96PY6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.36■■□□□ 1.01
NEK1Q96PY6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.36■■□□□ 1.01
NEK1Q96PY6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NEK1Q96PY6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
NEK1Q96PY6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NEK1Q96PY6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NEK1Q96PY6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NEK1Q96PY6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.36■■□□□ 1.01
NEK1Q96PY6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.36■■□□□ 1.01
NEK1Q96PY6 SPDYE13P-201ENST00000445314 798 ntBASIC21.36■■□□□ 1.01
NEK1Q96PY6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.36■■□□□ 1.01
NEK1Q96PY6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms