Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
DUX3Q96PT4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.06□□□□□ -0.16
DUX3Q96PT4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
DUX3Q96PT4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.06□□□□□ -0.16
DUX3Q96PT4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
DUX3Q96PT4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
DUX3Q96PT4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.06□□□□□ -0.16
DUX3Q96PT4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
DUX3Q96PT4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
DUX3Q96PT4 AL353692.3-201ENST00000407031 1396 ntBASIC14.06□□□□□ -0.16
DUX3Q96PT4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
DUX3Q96PT4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
DUX3Q96PT4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
DUX3Q96PT4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DUX3Q96PT4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
DUX3Q96PT4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
DUX3Q96PT4 SDHAP2-201ENST00000455183 2001 ntBASIC14.05□□□□□ -0.16
DUX3Q96PT4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
DUX3Q96PT4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
DUX3Q96PT4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
DUX3Q96PT4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.05□□□□□ -0.16
DUX3Q96PT4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
DUX3Q96PT4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
DUX3Q96PT4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
DUX3Q96PT4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DUX3Q96PT4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
DUX3Q96PT4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
DUX3Q96PT4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DUX3Q96PT4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DUX3Q96PT4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
DUX3Q96PT4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DUX3Q96PT4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DUX3Q96PT4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.05□□□□□ -0.16
DUX3Q96PT4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
DUX3Q96PT4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
DUX3Q96PT4 UNC93B7-201ENST00000509439 705 ntBASIC14.05□□□□□ -0.16
DUX3Q96PT4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.05□□□□□ -0.16
DUX3Q96PT4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DUX3Q96PT4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.05□□□□□ -0.16
DUX3Q96PT4 AC090616.6-201ENST00000582640 721 ntBASIC14.05□□□□□ -0.16
DUX3Q96PT4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.05□□□□□ -0.16
DUX3Q96PT4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
DUX3Q96PT4 AL691432.3-201ENST00000621860 400 ntBASIC14.05□□□□□ -0.16
DUX3Q96PT4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
DUX3Q96PT4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.05□□□□□ -0.16
DUX3Q96PT4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DUX3Q96PT4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DUX3Q96PT4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DUX3Q96PT4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.05□□□□□ -0.16
DUX3Q96PT4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DUX3Q96PT4 AC112777.1-201ENST00000540175 1423 ntBASIC14.05□□□□□ -0.16
DUX3Q96PT4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
DUX3Q96PT4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DUX3Q96PT4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.05□□□□□ -0.16
DUX3Q96PT4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
DUX3Q96PT4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.05□□□□□ -0.16
DUX3Q96PT4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.04□□□□□ -0.16
DUX3Q96PT4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
DUX3Q96PT4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
DUX3Q96PT4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
DUX3Q96PT4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DUX3Q96PT4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.04□□□□□ -0.16
DUX3Q96PT4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DUX3Q96PT4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DUX3Q96PT4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DUX3Q96PT4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.04□□□□□ -0.16
DUX3Q96PT4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DUX3Q96PT4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
DUX3Q96PT4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DUX3Q96PT4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DUX3Q96PT4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
DUX3Q96PT4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DUX3Q96PT4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DUX3Q96PT4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DUX3Q96PT4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DUX3Q96PT4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.04□□□□□ -0.16
DUX3Q96PT4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.04□□□□□ -0.16
DUX3Q96PT4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DUX3Q96PT4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DUX3Q96PT4 AL845331.1-201ENST00000424978 1190 ntBASIC14.04□□□□□ -0.16
DUX3Q96PT4 DRAXINP1-201ENST00000437611 948 ntBASIC14.04□□□□□ -0.16
DUX3Q96PT4 AC104819.1-201ENST00000504587 486 ntBASIC14.04□□□□□ -0.16
DUX3Q96PT4 GUSBP12-201ENST00000513727 720 ntBASIC14.04□□□□□ -0.16
DUX3Q96PT4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.04□□□□□ -0.16
DUX3Q96PT4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.04□□□□□ -0.16
DUX3Q96PT4 AC126763.1-201ENST00000552015 2118 ntBASIC14.04□□□□□ -0.16
DUX3Q96PT4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.04□□□□□ -0.16
DUX3Q96PT4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.04□□□□□ -0.16
DUX3Q96PT4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.04□□□□□ -0.16
DUX3Q96PT4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DUX3Q96PT4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.04□□□□□ -0.16
DUX3Q96PT4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DUX3Q96PT4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DUX3Q96PT4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DUX3Q96PT4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DUX3Q96PT4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DUX3Q96PT4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.04□□□□□ -0.16
DUX3Q96PT4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
DUX3Q96PT4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
DUX3Q96PT4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms