Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.69□□□□□ -0.06
ZNF48Q96MX3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.69□□□□□ -0.06
ZNF48Q96MX3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
ZNF48Q96MX3 REXO1L6P-202ENST00000619970 1078 ntBASIC14.69□□□□□ -0.06
ZNF48Q96MX3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.69□□□□□ -0.06
ZNF48Q96MX3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.69□□□□□ -0.06
ZNF48Q96MX3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ZNF48Q96MX3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZNF48Q96MX3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.69□□□□□ -0.06
ZNF48Q96MX3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.69□□□□□ -0.06
ZNF48Q96MX3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ZNF48Q96MX3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZNF48Q96MX3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZNF48Q96MX3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ZNF48Q96MX3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ZNF48Q96MX3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
ZNF48Q96MX3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 AL662844.1-201ENST00000546340 181 ntBASIC14.68□□□□□ -0.06
ZNF48Q96MX3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 BNIP3P18-201ENST00000593976 575 ntBASIC14.68□□□□□ -0.06
ZNF48Q96MX3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 AC073592.3-201ENST00000625118 1834 ntBASIC14.68□□□□□ -0.06
ZNF48Q96MX3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC14.68□□□□□ -0.06
ZNF48Q96MX3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 TP73-AS1-207ENST00000624167 988 ntBASIC14.67□□□□□ -0.06
ZNF48Q96MX3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 AC009102.3-201ENST00000623118 1491 ntBASIC14.67□□□□□ -0.06
ZNF48Q96MX3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF48Q96MX3 HLA-A-201ENST00000376802 1334 ntBASIC14.66□□□□□ -0.06
ZNF48Q96MX3 AIRN-201ENST00000601203 4374 ntBASIC14.66□□□□□ -0.06
ZNF48Q96MX3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms