Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 AC092368.3-202ENST00000574180 1591 ntBASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 AC092068.3-201ENST00000587894 2016 ntBASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM2Q96JY6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM2Q96JY6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 AC092850.2-201ENST00000623821 2697 ntBASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 AC092118.2-201ENST00000613495 667 ntBASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 LINC01451-201ENST00000623792 534 ntBASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 HLA-B-256ENST00000639848 1089 ntBASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.93■□□□□ 0.78
PDLIM2Q96JY6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDLIM2Q96JY6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms