Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 AC006011.2-201ENST00000621313 1158 ntBASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PDLIM5Q96HC4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
PDLIM5Q96HC4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
PDLIM5Q96HC4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PDLIM5Q96HC4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PDLIM5Q96HC4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
PDLIM5Q96HC4 AC100803.2-201ENST00000562459 1963 ntBASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 HBZP1-201ENST00000354915 429 ntBASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 HYMAI.1-201ENST00000620949 238 ntBASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 AC009154.2-201ENST00000621177 724 ntBASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDLIM5Q96HC4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 AK4P3-201ENST00000418260 669 ntBASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 KRT18P57-201ENST00000443599 1254 ntBASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 KRT18P38-201ENST00000449496 1282 ntBASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.63■□□□□ 0.41
PDLIM5Q96HC4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM5Q96HC4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms