Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.25■□□□□ 0.51
LRRC39Q96DD0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRC39Q96DD0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC39Q96DD0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC39Q96DD0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
LRRC39Q96DD0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC39Q96DD0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC39Q96DD0 AL138688.1-201ENST00000624851 1594 ntBASIC18.25■□□□□ 0.51
LRRC39Q96DD0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.25■□□□□ 0.51
LRRC39Q96DD0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRC39Q96DD0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 MIR3917-201ENST00000580971 93 ntBASIC18.24■□□□□ 0.51
LRRC39Q96DD0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 AL355312.1-201ENST00000407115 2176 ntBASIC18.24■□□□□ 0.51
LRRC39Q96DD0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC39Q96DD0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 AC108860.2-201ENST00000562760 2183 ntBASIC18.23■□□□□ 0.51
LRRC39Q96DD0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 AC009947.2-201ENST00000444014 672 ntBASIC18.23■□□□□ 0.51
LRRC39Q96DD0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 AL355075.4-201ENST00000554988 638 ntBASIC18.23■□□□□ 0.51
LRRC39Q96DD0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 AC024243.1-201ENST00000609234 778 ntBASIC18.23■□□□□ 0.51
LRRC39Q96DD0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.23■□□□□ 0.51
LRRC39Q96DD0 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 PP12613-201ENST00000424958 2230 ntBASIC18.23■□□□□ 0.51
LRRC39Q96DD0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 AL023806.1-201ENST00000603994 1649 ntBASIC18.23■□□□□ 0.51
LRRC39Q96DD0 LINC00167-201ENST00000530583 1419 ntBASIC18.23■□□□□ 0.51
LRRC39Q96DD0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC39Q96DD0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 PVRIG2P-201ENST00000435460 978 ntBASIC18.22■□□□□ 0.51
LRRC39Q96DD0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC39Q96DD0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms