Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF25Q96BH1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
RNF25Q96BH1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF25Q96BH1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF25Q96BH1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF25Q96BH1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RNF25Q96BH1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF25Q96BH1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF25Q96BH1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF25Q96BH1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF25Q96BH1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF25Q96BH1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RNF25Q96BH1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF25Q96BH1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
RNF25Q96BH1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF25Q96BH1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF25Q96BH1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF25Q96BH1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RNF25Q96BH1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RNF25Q96BH1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RNF25Q96BH1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF25Q96BH1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF25Q96BH1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19■□□□□ 0.63
RNF25Q96BH1 GRAMD4P1-201ENST00000435181 1110 ntBASIC19■□□□□ 0.63
RNF25Q96BH1 AC009947.2-201ENST00000444014 672 ntBASIC19■□□□□ 0.63
RNF25Q96BH1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RNF25Q96BH1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF25Q96BH1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19■□□□□ 0.63
RNF25Q96BH1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19■□□□□ 0.63
RNF25Q96BH1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
RNF25Q96BH1 AC121493.1-201ENST00000602316 450 ntBASIC19■□□□□ 0.63
RNF25Q96BH1 AC010240.3-201ENST00000607688 395 ntBASIC19■□□□□ 0.63
RNF25Q96BH1 AC024243.1-201ENST00000609234 778 ntBASIC19■□□□□ 0.63
RNF25Q96BH1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF25Q96BH1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF25Q96BH1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF25Q96BH1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RNF25Q96BH1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF25Q96BH1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
RNF25Q96BH1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19■□□□□ 0.63
RNF25Q96BH1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF25Q96BH1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RNF25Q96BH1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19■□□□□ 0.63
RNF25Q96BH1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF25Q96BH1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RNF25Q96BH1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF25Q96BH1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF25Q96BH1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF25Q96BH1 AL645608.8-201ENST00000606034 2086 ntBASIC18.99■□□□□ 0.63
RNF25Q96BH1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF25Q96BH1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RNF25Q96BH1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF25Q96BH1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF25Q96BH1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF25Q96BH1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF25Q96BH1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF25Q96BH1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF25Q96BH1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RNF25Q96BH1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.99■□□□□ 0.63
RNF25Q96BH1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF25Q96BH1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF25Q96BH1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF25Q96BH1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF25Q96BH1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.99■□□□□ 0.63
RNF25Q96BH1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF25Q96BH1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF25Q96BH1 BNIP3P41-202ENST00000616656 861 ntBASIC18.99■□□□□ 0.63
RNF25Q96BH1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF25Q96BH1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF25Q96BH1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF25Q96BH1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF25Q96BH1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF25Q96BH1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF25Q96BH1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF25Q96BH1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF25Q96BH1 AL024508.2-201ENST00000607749 1894 ntBASIC18.99■□□□□ 0.63
RNF25Q96BH1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF25Q96BH1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF25Q96BH1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF25Q96BH1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF25Q96BH1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF25Q96BH1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF25Q96BH1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF25Q96BH1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RNF25Q96BH1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF25Q96BH1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
RNF25Q96BH1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF25Q96BH1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RNF25Q96BH1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF25Q96BH1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF25Q96BH1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF25Q96BH1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF25Q96BH1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF25Q96BH1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF25Q96BH1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.98■□□□□ 0.63
RNF25Q96BH1 AL596275.1-201ENST00000423464 877 ntBASIC18.98■□□□□ 0.63
RNF25Q96BH1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.98■□□□□ 0.63
RNF25Q96BH1 FAM87A-204ENST00000613235 858 ntBASIC18.98■□□□□ 0.63
RNF25Q96BH1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RNF25Q96BH1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms