Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 AC116562.2-201ENST00000507042 360 ntBASIC17.38■□□□□ 0.37
VPS33AQ96AX1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 DGCR10-201ENST00000609839 495 ntBASIC17.38■□□□□ 0.37
VPS33AQ96AX1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 KRT18P55-202ENST00000578578 1546 ntBASIC17.37■□□□□ 0.37
VPS33AQ96AX1 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VPS33AQ96AX1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS33AQ96AX1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
VPS33AQ96AX1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS33AQ96AX1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
VPS33AQ96AX1 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.36■□□□□ 0.37
VPS33AQ96AX1 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS33AQ96AX1 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VPS33AQ96AX1 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
VPS33AQ96AX1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VPS33AQ96AX1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS33AQ96AX1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
VPS33AQ96AX1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.36■□□□□ 0.37
VPS33AQ96AX1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.36■□□□□ 0.37
VPS33AQ96AX1 CA15P1-201ENST00000481698 905 ntBASIC17.36■□□□□ 0.37
VPS33AQ96AX1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.36■□□□□ 0.37
VPS33AQ96AX1 NUDT16P1-203ENST00000513809 620 ntBASIC17.36■□□□□ 0.37
VPS33AQ96AX1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
VPS33AQ96AX1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.36■□□□□ 0.37
VPS33AQ96AX1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.36■□□□□ 0.37
VPS33AQ96AX1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.36■□□□□ 0.37
VPS33AQ96AX1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.36■□□□□ 0.37
VPS33AQ96AX1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.36■□□□□ 0.37
VPS33AQ96AX1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS33AQ96AX1 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
VPS33AQ96AX1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VPS33AQ96AX1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
VPS33AQ96AX1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VPS33AQ96AX1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.36■□□□□ 0.37
VPS33AQ96AX1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.35■□□□□ 0.37
VPS33AQ96AX1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms