Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2E3Q969T4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 KRT18P55-202ENST00000578578 1546 ntBASIC17.38■□□□□ 0.37
UBE2E3Q969T4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 AC006011.2-201ENST00000621313 1158 ntBASIC17.38■□□□□ 0.37
UBE2E3Q969T4 AC079602.3-201ENST00000623931 403 ntBASIC17.38■□□□□ 0.37
UBE2E3Q969T4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2E3Q969T4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 AP000997.3-201ENST00000623333 2250 ntBASIC17.37■□□□□ 0.37
UBE2E3Q969T4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.37■□□□□ 0.37
UBE2E3Q969T4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2E3Q969T4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms