Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RPGRQ92834 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RPGRQ92834 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RPGRQ92834 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RPGRQ92834 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC22.16■■□□□ 1.14
RPGRQ92834 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RPGRQ92834 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RPGRQ92834 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC22.16■■□□□ 1.14
RPGRQ92834 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
RPGRQ92834 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC22.16■■□□□ 1.14
RPGRQ92834 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC22.16■■□□□ 1.14
RPGRQ92834 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC22.16■■□□□ 1.14
RPGRQ92834 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RPGRQ92834 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RPGRQ92834 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC22.16■■□□□ 1.14
RPGRQ92834 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RPGRQ92834 AC002347.1-201ENST00000569543 541 ntBASIC22.16■■□□□ 1.14
RPGRQ92834 SDCCAG3P1-201ENST00000589292 1150 ntBASIC22.16■■□□□ 1.14
RPGRQ92834 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RPGRQ92834 AC079781.4-201ENST00000641908 219 ntBASIC22.16■■□□□ 1.14
RPGRQ92834 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RPGRQ92834 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RPGRQ92834 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RPGRQ92834 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
RPGRQ92834 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RPGRQ92834 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RPGRQ92834 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RPGRQ92834 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RPGRQ92834 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC22.15■■□□□ 1.14
RPGRQ92834 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.15■■□□□ 1.14
RPGRQ92834 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
RPGRQ92834 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RPGRQ92834 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC22.15■■□□□ 1.14
RPGRQ92834 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
RPGRQ92834 ANO7L1-203ENST00000602586 1720 ntBASIC22.15■■□□□ 1.14
RPGRQ92834 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC22.15■■□□□ 1.14
RPGRQ92834 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RPGRQ92834 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
RPGRQ92834 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC22.15■■□□□ 1.14
RPGRQ92834 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RPGRQ92834 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC22.15■■□□□ 1.14
RPGRQ92834 AC004832.2-201ENST00000426397 482 ntBASIC22.15■■□□□ 1.14
RPGRQ92834 AC004967.1-201ENST00000453589 447 ntBASIC22.15■■□□□ 1.14
RPGRQ92834 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RPGRQ92834 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
RPGRQ92834 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RPGRQ92834 CYGB-205ENST00000590175 830 ntTSL 3 BASIC22.15■■□□□ 1.14
RPGRQ92834 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC22.15■■□□□ 1.14
RPGRQ92834 AC005593.1-201ENST00000624894 515 ntBASIC22.15■■□□□ 1.14
RPGRQ92834 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RPGRQ92834 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RPGRQ92834 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RPGRQ92834 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RPGRQ92834 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RPGRQ92834 PMPCAP1-201ENST00000508114 1576 ntBASIC22.15■■□□□ 1.14
RPGRQ92834 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
RPGRQ92834 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RPGRQ92834 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
RPGRQ92834 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC22.14■■□□□ 1.14
RPGRQ92834 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC22.14■■□□□ 1.14
RPGRQ92834 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.14
RPGRQ92834 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RPGRQ92834 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RPGRQ92834 HNRNPA1P28-201ENST00000424481 961 ntBASIC22.14■■□□□ 1.13
RPGRQ92834 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC22.14■■□□□ 1.13
RPGRQ92834 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RPGRQ92834 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC22.14■■□□□ 1.13
RPGRQ92834 AC006557.2-201ENST00000592985 1240 ntBASIC22.14■■□□□ 1.13
RPGRQ92834 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC22.14■■□□□ 1.13
RPGRQ92834 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC22.14■■□□□ 1.13
RPGRQ92834 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RPGRQ92834 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC22.14■■□□□ 1.13
RPGRQ92834 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC22.14■■□□□ 1.13
RPGRQ92834 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RPGRQ92834 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RPGRQ92834 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
RPGRQ92834 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RPGRQ92834 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC22.13■■□□□ 1.13
RPGRQ92834 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC22.13■■□□□ 1.13
RPGRQ92834 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
RPGRQ92834 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
RPGRQ92834 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC22.13■■□□□ 1.13
RPGRQ92834 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RPGRQ92834 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC22.13■■□□□ 1.13
RPGRQ92834 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RPGRQ92834 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC22.13■■□□□ 1.13
RPGRQ92834 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC22.13■■□□□ 1.13
RPGRQ92834 AC023274.1-201ENST00000418278 595 ntBASIC22.13■■□□□ 1.13
RPGRQ92834 PMS2P2-201ENST00000425039 1128 ntBASIC22.13■■□□□ 1.13
RPGRQ92834 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RPGRQ92834 URGCP-206ENST00000446958 365 ntTSL 2 BASIC22.13■■□□□ 1.13
RPGRQ92834 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC22.13■■□□□ 1.13
RPGRQ92834 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC22.13■■□□□ 1.13
RPGRQ92834 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC22.13■■□□□ 1.13
RPGRQ92834 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC22.13■■□□□ 1.13
RPGRQ92834 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC22.13■■□□□ 1.13
RPGRQ92834 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RPGRQ92834 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC22.13■■□□□ 1.13
RPGRQ92834 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC22.13■■□□□ 1.13
RPGRQ92834 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms