Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.27■□□□□ 0.68
SHC3Q92529 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.27■□□□□ 0.68
SHC3Q92529 DUX4L26-201ENST00000489078 1255 ntBASIC19.27■□□□□ 0.68
SHC3Q92529 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.27■□□□□ 0.68
SHC3Q92529 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.27■□□□□ 0.68
SHC3Q92529 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.27■□□□□ 0.68
SHC3Q92529 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.27■□□□□ 0.68
SHC3Q92529 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.27■□□□□ 0.68
SHC3Q92529 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHC3Q92529 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.27■□□□□ 0.68
SHC3Q92529 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHC3Q92529 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHC3Q92529 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHC3Q92529 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SHC3Q92529 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
SHC3Q92529 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
SHC3Q92529 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SHC3Q92529 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SHC3Q92529 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.27■□□□□ 0.67
SHC3Q92529 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
SHC3Q92529 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHC3Q92529 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.26■□□□□ 0.67
SHC3Q92529 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SHC3Q92529 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHC3Q92529 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHC3Q92529 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHC3Q92529 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SHC3Q92529 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SHC3Q92529 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
SHC3Q92529 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.26■□□□□ 0.67
SHC3Q92529 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.26■□□□□ 0.67
SHC3Q92529 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.26■□□□□ 0.67
SHC3Q92529 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SHC3Q92529 AC083849.1-201ENST00000615227 514 ntBASIC19.26■□□□□ 0.67
SHC3Q92529 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SHC3Q92529 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SHC3Q92529 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHC3Q92529 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SHC3Q92529 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHC3Q92529 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SHC3Q92529 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHC3Q92529 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SHC3Q92529 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SHC3Q92529 LINC01311-201ENST00000565162 1445 ntBASIC19.25■□□□□ 0.67
SHC3Q92529 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
SHC3Q92529 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHC3Q92529 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHC3Q92529 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SHC3Q92529 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHC3Q92529 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHC3Q92529 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
SHC3Q92529 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.25■□□□□ 0.67
SHC3Q92529 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
SHC3Q92529 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.25■□□□□ 0.67
SHC3Q92529 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.25■□□□□ 0.67
SHC3Q92529 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SHC3Q92529 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHC3Q92529 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHC3Q92529 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.25■□□□□ 0.67
SHC3Q92529 TMPOP1-202ENST00000424642 1267 ntBASIC19.25■□□□□ 0.67
SHC3Q92529 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.25■□□□□ 0.67
SHC3Q92529 AP003733.1-201ENST00000491725 852 ntBASIC19.25■□□□□ 0.67
SHC3Q92529 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.25■□□□□ 0.67
SHC3Q92529 ZNF444P1-201ENST00000559497 298 ntBASIC19.25■□□□□ 0.67
SHC3Q92529 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.25■□□□□ 0.67
SHC3Q92529 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.25■□□□□ 0.67
SHC3Q92529 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHC3Q92529 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHC3Q92529 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHC3Q92529 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHC3Q92529 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHC3Q92529 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SHC3Q92529 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHC3Q92529 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHC3Q92529 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHC3Q92529 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC3Q92529 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.24■□□□□ 0.67
SHC3Q92529 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SHC3Q92529 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC3Q92529 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC3Q92529 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC3Q92529 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SHC3Q92529 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SHC3Q92529 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.24■□□□□ 0.67
SHC3Q92529 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.24■□□□□ 0.67
SHC3Q92529 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.24■□□□□ 0.67
SHC3Q92529 AC009154.2-201ENST00000621177 724 ntBASIC19.24■□□□□ 0.67
SHC3Q92529 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SHC3Q92529 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC3Q92529 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC3Q92529 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC3Q92529 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.24■□□□□ 0.67
SHC3Q92529 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC3Q92529 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SHC3Q92529 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SHC3Q92529 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.24■□□□□ 0.67
SHC3Q92529 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC3Q92529 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SHC3Q92529 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC3Q92529 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms