Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SNED1Q8TER0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC21.86■■□□□ 1.09
SNED1Q8TER0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SNED1Q8TER0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SNED1Q8TER0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.86■■□□□ 1.09
SNED1Q8TER0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SNED1Q8TER0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SNED1Q8TER0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SNED1Q8TER0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SNED1Q8TER0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
SNED1Q8TER0 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SNED1Q8TER0 AC254562.1-201ENST00000417586 456 ntBASIC21.86■■□□□ 1.09
SNED1Q8TER0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC21.86■■□□□ 1.09
SNED1Q8TER0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SNED1Q8TER0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SNED1Q8TER0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.86■■□□□ 1.09
SNED1Q8TER0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SNED1Q8TER0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
SNED1Q8TER0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SNED1Q8TER0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SNED1Q8TER0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC21.86■■□□□ 1.09
SNED1Q8TER0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SNED1Q8TER0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNED1Q8TER0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNED1Q8TER0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNED1Q8TER0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SNED1Q8TER0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.85■■□□□ 1.09
SNED1Q8TER0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNED1Q8TER0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNED1Q8TER0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNED1Q8TER0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
SNED1Q8TER0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SNED1Q8TER0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC21.85■■□□□ 1.09
SNED1Q8TER0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC21.85■■□□□ 1.09
SNED1Q8TER0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC21.85■■□□□ 1.09
SNED1Q8TER0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC21.85■■□□□ 1.09
SNED1Q8TER0 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC21.85■■□□□ 1.09
SNED1Q8TER0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC21.85■■□□□ 1.09
SNED1Q8TER0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC21.85■■□□□ 1.09
SNED1Q8TER0 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC21.85■■□□□ 1.09
SNED1Q8TER0 MIR4469-201ENST00000583919 79 ntBASIC21.85■■□□□ 1.09
SNED1Q8TER0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC21.85■■□□□ 1.09
SNED1Q8TER0 AC005593.1-201ENST00000624894 515 ntBASIC21.85■■□□□ 1.09
SNED1Q8TER0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.85■■□□□ 1.09
SNED1Q8TER0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNED1Q8TER0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC21.85■■□□□ 1.09
SNED1Q8TER0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.85■■□□□ 1.09
SNED1Q8TER0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.85■■□□□ 1.09
SNED1Q8TER0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.85■■□□□ 1.09
SNED1Q8TER0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
SNED1Q8TER0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNED1Q8TER0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNED1Q8TER0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.84■■□□□ 1.09
SNED1Q8TER0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SNED1Q8TER0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNED1Q8TER0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNED1Q8TER0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC21.84■■□□□ 1.09
SNED1Q8TER0 HTR5BP-201ENST00000430851 1154 ntBASIC21.84■■□□□ 1.09
SNED1Q8TER0 AC108073.2-201ENST00000464002 357 ntBASIC21.84■■□□□ 1.09
SNED1Q8TER0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC21.84■■□□□ 1.09
SNED1Q8TER0 MIR3197-201ENST00000582241 73 ntBASIC21.84■■□□□ 1.09
SNED1Q8TER0 AC027612.4-201ENST00000605371 583 ntBASIC21.84■■□□□ 1.09
SNED1Q8TER0 AC004706.3-202ENST00000621574 984 ntBASIC21.84■■□□□ 1.09
SNED1Q8TER0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNED1Q8TER0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNED1Q8TER0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.84■■□□□ 1.09
SNED1Q8TER0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.84■■□□□ 1.09
SNED1Q8TER0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC21.84■■□□□ 1.09
SNED1Q8TER0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
SNED1Q8TER0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNED1Q8TER0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNED1Q8TER0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.83■■□□□ 1.09
SNED1Q8TER0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SNED1Q8TER0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SNED1Q8TER0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.83■■□□□ 1.09
SNED1Q8TER0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SNED1Q8TER0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.83■■□□□ 1.09
SNED1Q8TER0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SNED1Q8TER0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SNED1Q8TER0 HCG4B-203ENST00000450128 991 ntBASIC21.83■■□□□ 1.09
SNED1Q8TER0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC21.83■■□□□ 1.09
SNED1Q8TER0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC21.83■■□□□ 1.09
SNED1Q8TER0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC21.83■■□□□ 1.09
SNED1Q8TER0 AC005829.1-201ENST00000570002 483 ntBASIC21.83■■□□□ 1.09
SNED1Q8TER0 AL596442.2-201ENST00000610240 980 ntBASIC21.83■■□□□ 1.09
SNED1Q8TER0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
SNED1Q8TER0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SNED1Q8TER0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SNED1Q8TER0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNED1Q8TER0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNED1Q8TER0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.82■■□□□ 1.08
SNED1Q8TER0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNED1Q8TER0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNED1Q8TER0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNED1Q8TER0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SNED1Q8TER0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNED1Q8TER0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC21.82■■□□□ 1.08
SNED1Q8TER0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SNED1Q8TER0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC21.82■■□□□ 1.08
SNED1Q8TER0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms