Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 SNHG9-202ENST00000564014 471 ntBASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 AC005829.1-201ENST00000570002 483 ntBASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 AC092364.2-202ENST00000597012 1073 ntBASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 AC064836.3-201ENST00000607928 673 ntBASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.98■□□□□ 0.31
SNIP1Q8TAD8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 AL020996.1-203ENST00000536896 2307 ntBASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 AC254562.1-201ENST00000417586 456 ntBASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 FAM8A3P-201ENST00000427218 844 ntBASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 PGM5P2-202ENST00000637225 1043 ntBASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.97■□□□□ 0.31
SNIP1Q8TAD8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNIP1Q8TAD8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms