Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 TSPY14P-201ENST00000303979 915 ntBASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 AC012313.1-201ENST00000593393 3059 ntBASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLHC1Q8NHS4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLHC1Q8NHS4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLHC1Q8NHS4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLHC1Q8NHS4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLHC1Q8NHS4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLHC1Q8NHS4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLHC1Q8NHS4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLHC1Q8NHS4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLHC1Q8NHS4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
CLHC1Q8NHS4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLHC1Q8NHS4 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.36■□□□□ 0.37
CLHC1Q8NHS4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.36■□□□□ 0.37
CLHC1Q8NHS4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.36■□□□□ 0.37
CLHC1Q8NHS4 AC010240.3-201ENST00000607688 395 ntBASIC17.36■□□□□ 0.37
CLHC1Q8NHS4 AC024243.1-201ENST00000609234 778 ntBASIC17.36■□□□□ 0.37
CLHC1Q8NHS4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CLHC1Q8NHS4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLHC1Q8NHS4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLHC1Q8NHS4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLHC1Q8NHS4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLHC1Q8NHS4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLHC1Q8NHS4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.36■□□□□ 0.37
CLHC1Q8NHS4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 AC009947.2-201ENST00000444014 672 ntBASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 MIR4497-201ENST00000583208 89 ntBASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 AC010947.1-201ENST00000623454 693 ntBASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 AC010653.2-201ENST00000623505 997 ntBASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLHC1Q8NHS4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.34■□□□□ 0.37
CLHC1Q8NHS4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLHC1Q8NHS4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLHC1Q8NHS4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.34■□□□□ 0.37
CLHC1Q8NHS4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLHC1Q8NHS4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLHC1Q8NHS4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLHC1Q8NHS4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.34■□□□□ 0.37
CLHC1Q8NHS4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLHC1Q8NHS4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLHC1Q8NHS4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.34■□□□□ 0.37
CLHC1Q8NHS4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms