Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CPEB3Q8NE35 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 MIR662-201ENST00000384847 95 ntBASIC15.81■□□□□ 0.12
CPEB3Q8NE35 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 AC008687.5-201ENST00000593746 558 ntBASIC15.81■□□□□ 0.12
CPEB3Q8NE35 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPEB3Q8NE35 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 KRT89P-201ENST00000620027 1478 ntBASIC15.8■□□□□ 0.12
CPEB3Q8NE35 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 AL031133.1-201ENST00000406807 723 ntBASIC15.8■□□□□ 0.12
CPEB3Q8NE35 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 ZNF444P1-201ENST00000559497 298 ntBASIC15.8■□□□□ 0.12
CPEB3Q8NE35 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPEB3Q8NE35 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 AC132938.6-201ENST00000623828 1655 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms