Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
C3orf56Q8N813 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.1□□□□□ -0.15
C3orf56Q8N813 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC14.1□□□□□ -0.15
C3orf56Q8N813 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 MIR770-201ENST00000390219 98 ntBASIC14.1□□□□□ -0.15
C3orf56Q8N813 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.1□□□□□ -0.15
C3orf56Q8N813 AC254562.1-201ENST00000417586 456 ntBASIC14.1□□□□□ -0.15
C3orf56Q8N813 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.1□□□□□ -0.15
C3orf56Q8N813 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.1□□□□□ -0.15
C3orf56Q8N813 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 AP002472.1-201ENST00000577490 586 ntBASIC14.1□□□□□ -0.15
C3orf56Q8N813 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
C3orf56Q8N813 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
C3orf56Q8N813 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.1□□□□□ -0.15
C3orf56Q8N813 AC106028.4-201ENST00000614509 607 ntBASIC14.1□□□□□ -0.15
C3orf56Q8N813 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.1□□□□□ -0.15
C3orf56Q8N813 PGM5P2-202ENST00000637225 1043 ntBASIC14.1□□□□□ -0.15
C3orf56Q8N813 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
C3orf56Q8N813 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.1□□□□□ -0.15
C3orf56Q8N813 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.1□□□□□ -0.15
C3orf56Q8N813 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.1□□□□□ -0.15
C3orf56Q8N813 FEM1AP3-201ENST00000403722 1741 ntBASIC14.1□□□□□ -0.15
C3orf56Q8N813 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C3orf56Q8N813 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.09□□□□□ -0.15
C3orf56Q8N813 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C3orf56Q8N813 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C3orf56Q8N813 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C3orf56Q8N813 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C3orf56Q8N813 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C3orf56Q8N813 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C3orf56Q8N813 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.09□□□□□ -0.15
C3orf56Q8N813 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C3orf56Q8N813 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
C3orf56Q8N813 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C3orf56Q8N813 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.09□□□□□ -0.15
C3orf56Q8N813 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
C3orf56Q8N813 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
C3orf56Q8N813 LAGE3P1-201ENST00000425356 484 ntBASIC14.09□□□□□ -0.15
C3orf56Q8N813 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.09□□□□□ -0.15
C3orf56Q8N813 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.09□□□□□ -0.15
C3orf56Q8N813 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.09□□□□□ -0.15
C3orf56Q8N813 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.09□□□□□ -0.15
C3orf56Q8N813 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.09□□□□□ -0.15
C3orf56Q8N813 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.09□□□□□ -0.15
C3orf56Q8N813 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.09□□□□□ -0.15
C3orf56Q8N813 NKAPP1-205ENST00000585790 367 ntBASIC14.09□□□□□ -0.15
C3orf56Q8N813 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.09□□□□□ -0.15
C3orf56Q8N813 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.09□□□□□ -0.15
C3orf56Q8N813 AC064836.3-201ENST00000607928 673 ntBASIC14.09□□□□□ -0.15
C3orf56Q8N813 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
C3orf56Q8N813 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C3orf56Q8N813 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
C3orf56Q8N813 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C3orf56Q8N813 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C3orf56Q8N813 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
C3orf56Q8N813 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C3orf56Q8N813 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.09□□□□□ -0.15
C3orf56Q8N813 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C3orf56Q8N813 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C3orf56Q8N813 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.09□□□□□ -0.15
C3orf56Q8N813 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.09□□□□□ -0.15
C3orf56Q8N813 Z98044.1-201ENST00000632503 1764 ntBASIC14.09□□□□□ -0.15
C3orf56Q8N813 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
C3orf56Q8N813 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C3orf56Q8N813 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.09□□□□□ -0.15
C3orf56Q8N813 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C3orf56Q8N813 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
C3orf56Q8N813 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
C3orf56Q8N813 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C3orf56Q8N813 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C3orf56Q8N813 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms