Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.74■□□□□ 0.59
SCML4Q8N228 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCML4Q8N228 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCML4Q8N228 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCML4Q8N228 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCML4Q8N228 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCML4Q8N228 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.74■□□□□ 0.59
SCML4Q8N228 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.74■□□□□ 0.59
SCML4Q8N228 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.74■□□□□ 0.59
SCML4Q8N228 AC009533.2-201ENST00000543664 586 ntBASIC18.74■□□□□ 0.59
SCML4Q8N228 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.74■□□□□ 0.59
SCML4Q8N228 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.74■□□□□ 0.59
SCML4Q8N228 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCML4Q8N228 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SCML4Q8N228 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
SCML4Q8N228 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
SCML4Q8N228 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCML4Q8N228 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.74■□□□□ 0.59
SCML4Q8N228 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SCML4Q8N228 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCML4Q8N228 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.74■□□□□ 0.59
SCML4Q8N228 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCML4Q8N228 AP000997.3-201ENST00000623333 2250 ntBASIC18.74■□□□□ 0.59
SCML4Q8N228 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCML4Q8N228 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCML4Q8N228 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SCML4Q8N228 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCML4Q8N228 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SCML4Q8N228 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.73■□□□□ 0.59
SCML4Q8N228 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCML4Q8N228 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCML4Q8N228 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCML4Q8N228 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SCML4Q8N228 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCML4Q8N228 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCML4Q8N228 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.73■□□□□ 0.59
SCML4Q8N228 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SCML4Q8N228 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.73■□□□□ 0.59
SCML4Q8N228 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.73■□□□□ 0.59
SCML4Q8N228 AC116407.2-201ENST00000613639 860 ntBASIC18.73■□□□□ 0.59
SCML4Q8N228 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.73■□□□□ 0.59
SCML4Q8N228 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.73■□□□□ 0.59
SCML4Q8N228 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCML4Q8N228 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.73■□□□□ 0.59
SCML4Q8N228 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.73■□□□□ 0.59
SCML4Q8N228 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCML4Q8N228 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCML4Q8N228 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCML4Q8N228 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCML4Q8N228 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCML4Q8N228 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SCML4Q8N228 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCML4Q8N228 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.73■□□□□ 0.59
SCML4Q8N228 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCML4Q8N228 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCML4Q8N228 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.72■□□□□ 0.59
SCML4Q8N228 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.72■□□□□ 0.59
SCML4Q8N228 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCML4Q8N228 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCML4Q8N228 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCML4Q8N228 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCML4Q8N228 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SCML4Q8N228 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SCML4Q8N228 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCML4Q8N228 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCML4Q8N228 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCML4Q8N228 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SCML4Q8N228 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCML4Q8N228 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCML4Q8N228 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.72■□□□□ 0.59
SCML4Q8N228 DDX43P3-201ENST00000441064 443 ntBASIC18.72■□□□□ 0.59
SCML4Q8N228 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCML4Q8N228 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.72■□□□□ 0.59
SCML4Q8N228 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.72■□□□□ 0.59
SCML4Q8N228 BNIP3P18-201ENST00000593976 575 ntBASIC18.72■□□□□ 0.59
SCML4Q8N228 CLEC4GP1-201ENST00000596555 870 ntBASIC18.72■□□□□ 0.59
SCML4Q8N228 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.72■□□□□ 0.59
SCML4Q8N228 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.72■□□□□ 0.59
SCML4Q8N228 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCML4Q8N228 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SCML4Q8N228 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCML4Q8N228 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCML4Q8N228 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.72■□□□□ 0.59
SCML4Q8N228 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SCML4Q8N228 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.72■□□□□ 0.59
SCML4Q8N228 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.71■□□□□ 0.59
SCML4Q8N228 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.71■□□□□ 0.59
SCML4Q8N228 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SCML4Q8N228 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCML4Q8N228 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.71■□□□□ 0.59
SCML4Q8N228 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCML4Q8N228 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SCML4Q8N228 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SCML4Q8N228 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCML4Q8N228 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCML4Q8N228 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCML4Q8N228 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.71■□□□□ 0.59
SCML4Q8N228 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.71■□□□□ 0.59
SCML4Q8N228 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.71■□□□□ 0.59
SCML4Q8N228 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms