Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
TMEFF1Q8IYR6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEFF1Q8IYR6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEFF1Q8IYR6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TMEFF1Q8IYR6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEFF1Q8IYR6 RPSAP43-201ENST00000402237 625 ntBASIC17.89■□□□□ 0.45
TMEFF1Q8IYR6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.89■□□□□ 0.45
TMEFF1Q8IYR6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.89■□□□□ 0.45
TMEFF1Q8IYR6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.89■□□□□ 0.45
TMEFF1Q8IYR6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TMEFF1Q8IYR6 NKAPP1-205ENST00000585790 367 ntBASIC17.89■□□□□ 0.45
TMEFF1Q8IYR6 AL139424.1-201ENST00000607572 797 ntBASIC17.89■□□□□ 0.45
TMEFF1Q8IYR6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TMEFF1Q8IYR6 AC008735.5-201ENST00000623544 497 ntBASIC17.89■□□□□ 0.45
TMEFF1Q8IYR6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEFF1Q8IYR6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TMEFF1Q8IYR6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.89■□□□□ 0.45
TMEFF1Q8IYR6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.89■□□□□ 0.45
TMEFF1Q8IYR6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TMEFF1Q8IYR6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEFF1Q8IYR6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TMEFF1Q8IYR6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEFF1Q8IYR6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEFF1Q8IYR6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TMEFF1Q8IYR6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEFF1Q8IYR6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TMEFF1Q8IYR6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 KRT18P65-201ENST00000439811 1286 ntBASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 AL139288.1-201ENST00000623748 933 ntBASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 AP002414.3-201ENST00000589352 1468 ntBASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEFF1Q8IYR6 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 YBX2P1-201ENST00000394192 760 ntBASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 GPX1P2-201ENST00000429271 606 ntBASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 AC112482.1-201ENST00000492080 688 ntBASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 AC105339.3-201ENST00000560043 636 ntBASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 MIR3687-2-201ENST00000577708 61 ntBASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 MIR3687-1-201ENST00000614492 61 ntBASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TMEFF1Q8IYR6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TMEFF1Q8IYR6 AP000974.1-201ENST00000623909 2387 ntBASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms