Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SMC5Q8IY18 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
SMC5Q8IY18 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SMC5Q8IY18 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SMC5Q8IY18 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC22.34■■□□□ 1.17
SMC5Q8IY18 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC22.34■■□□□ 1.17
SMC5Q8IY18 P4HB-223ENST00000576390 439 ntTSL 4 BASIC22.34■■□□□ 1.17
SMC5Q8IY18 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC22.34■■□□□ 1.17
SMC5Q8IY18 AC140113.3-201ENST00000605663 199 ntBASIC22.34■■□□□ 1.17
SMC5Q8IY18 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC22.34■■□□□ 1.17
SMC5Q8IY18 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SMC5Q8IY18 SIRPAP1-201ENST00000448467 1770 ntBASIC22.34■■□□□ 1.17
SMC5Q8IY18 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC22.34■■□□□ 1.17
SMC5Q8IY18 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC22.34■■□□□ 1.17
SMC5Q8IY18 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SMC5Q8IY18 LINC00304-203ENST00000565008 1864 ntBASIC22.34■■□□□ 1.17
SMC5Q8IY18 KRT8P47-201ENST00000604727 1398 ntBASIC22.34■■□□□ 1.17
SMC5Q8IY18 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SMC5Q8IY18 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SMC5Q8IY18 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SMC5Q8IY18 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SMC5Q8IY18 AC108860.2-201ENST00000562760 2183 ntBASIC22.33■■□□□ 1.17
SMC5Q8IY18 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SMC5Q8IY18 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SMC5Q8IY18 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
SMC5Q8IY18 AC133963.1-201ENST00000504166 1679 ntBASIC22.33■■□□□ 1.17
SMC5Q8IY18 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
SMC5Q8IY18 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC22.33■■□□□ 1.17
SMC5Q8IY18 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC22.33■■□□□ 1.17
SMC5Q8IY18 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
SMC5Q8IY18 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SMC5Q8IY18 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SMC5Q8IY18 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC22.33■■□□□ 1.17
SMC5Q8IY18 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC22.33■■□□□ 1.17
SMC5Q8IY18 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SMC5Q8IY18 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SMC5Q8IY18 YBX1P2-201ENST00000489612 999 ntBASIC22.33■■□□□ 1.17
SMC5Q8IY18 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC22.33■■□□□ 1.17
SMC5Q8IY18 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC22.33■■□□□ 1.17
SMC5Q8IY18 AC139887.4-201ENST00000607877 719 ntBASIC22.33■■□□□ 1.17
SMC5Q8IY18 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SMC5Q8IY18 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SMC5Q8IY18 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SMC5Q8IY18 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC22.33■■□□□ 1.17
SMC5Q8IY18 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
SMC5Q8IY18 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SMC5Q8IY18 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
SMC5Q8IY18 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SMC5Q8IY18 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SMC5Q8IY18 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
SMC5Q8IY18 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC22.32■■□□□ 1.16
SMC5Q8IY18 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
SMC5Q8IY18 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SMC5Q8IY18 AC117947.1-201ENST00000427448 529 ntBASIC22.32■■□□□ 1.16
SMC5Q8IY18 BX664615.1-201ENST00000443558 458 ntBASIC22.32■■□□□ 1.16
SMC5Q8IY18 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC22.32■■□□□ 1.16
SMC5Q8IY18 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SMC5Q8IY18 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
SMC5Q8IY18 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SMC5Q8IY18 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SMC5Q8IY18 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
SMC5Q8IY18 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SMC5Q8IY18 AC141586.5-201ENST00000624546 2050 ntBASIC22.32■■□□□ 1.16
SMC5Q8IY18 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SMC5Q8IY18 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
SMC5Q8IY18 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SMC5Q8IY18 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SMC5Q8IY18 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SMC5Q8IY18 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SMC5Q8IY18 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
SMC5Q8IY18 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC22.31■■□□□ 1.16
SMC5Q8IY18 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC22.31■■□□□ 1.16
SMC5Q8IY18 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SMC5Q8IY18 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SMC5Q8IY18 LIN28AP1-201ENST00000429574 405 ntBASIC22.31■■□□□ 1.16
SMC5Q8IY18 AC092597.1-201ENST00000487352 616 ntBASIC22.31■■□□□ 1.16
SMC5Q8IY18 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC22.31■■□□□ 1.16
SMC5Q8IY18 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SMC5Q8IY18 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SMC5Q8IY18 AC005363.2-201ENST00000618631 242 ntBASIC22.31■■□□□ 1.16
SMC5Q8IY18 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SMC5Q8IY18 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC22.31■■□□□ 1.16
SMC5Q8IY18 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC22.31■■□□□ 1.16
SMC5Q8IY18 REXO1L11P-201ENST00000620964 1927 ntBASIC22.31■■□□□ 1.16
SMC5Q8IY18 AC009949.1-201ENST00000623048 1830 ntBASIC22.31■■□□□ 1.16
SMC5Q8IY18 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SMC5Q8IY18 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC22.31■■□□□ 1.16
SMC5Q8IY18 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
SMC5Q8IY18 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC22.31■■□□□ 1.16
SMC5Q8IY18 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMC5Q8IY18 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMC5Q8IY18 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMC5Q8IY18 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
SMC5Q8IY18 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC22.3■■□□□ 1.16
SMC5Q8IY18 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMC5Q8IY18 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMC5Q8IY18 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
SMC5Q8IY18 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
SMC5Q8IY18 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
SMC5Q8IY18 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms