Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC60Q8IWA6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC60Q8IWA6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC60Q8IWA6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CCDC60Q8IWA6 AC011467.2-201ENST00000598425 242 ntBASIC20.03■□□□□ 0.8
CCDC60Q8IWA6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC60Q8IWA6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
CCDC60Q8IWA6 INTS4P1-201ENST00000438455 1935 ntBASIC20.03■□□□□ 0.8
CCDC60Q8IWA6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC60Q8IWA6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC60Q8IWA6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC60Q8IWA6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC60Q8IWA6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC60Q8IWA6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC60Q8IWA6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC60Q8IWA6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC60Q8IWA6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC60Q8IWA6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC60Q8IWA6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 AC090164.3-201ENST00000610780 2143 ntBASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 DUTP2-201ENST00000519164 463 ntBASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 AL121912.1-201ENST00000603683 238 ntBASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC60Q8IWA6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC60Q8IWA6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.02■□□□□ 0.79
CCDC60Q8IWA6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC60Q8IWA6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC60Q8IWA6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
CCDC60Q8IWA6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 AC132008.2-207ENST00000454517 770 ntBASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 AL160237.2-201ENST00000556165 472 ntBASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC60Q8IWA6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20■□□□□ 0.79
CCDC60Q8IWA6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC60Q8IWA6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC60Q8IWA6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC60Q8IWA6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC60Q8IWA6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC60Q8IWA6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC60Q8IWA6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20■□□□□ 0.79
CCDC60Q8IWA6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CCDC60Q8IWA6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC60Q8IWA6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC60Q8IWA6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20■□□□□ 0.79
CCDC60Q8IWA6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC60Q8IWA6 AP002469.2-201ENST00000531724 424 ntBASIC20■□□□□ 0.79
CCDC60Q8IWA6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20■□□□□ 0.79
CCDC60Q8IWA6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20■□□□□ 0.79
CCDC60Q8IWA6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20■□□□□ 0.79
CCDC60Q8IWA6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC60Q8IWA6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20■□□□□ 0.79
CCDC60Q8IWA6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms