Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.02■□□□□ 0.16
LINC00346Q8IVM7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.02■□□□□ 0.16
LINC00346Q8IVM7 AL512604.3-201ENST00000569583 964 ntBASIC16.02■□□□□ 0.16
LINC00346Q8IVM7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.02■□□□□ 0.16
LINC00346Q8IVM7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.02■□□□□ 0.16
LINC00346Q8IVM7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.02■□□□□ 0.16
LINC00346Q8IVM7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.02■□□□□ 0.16
LINC00346Q8IVM7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
LINC00346Q8IVM7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LINC00346Q8IVM7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LINC00346Q8IVM7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LINC00346Q8IVM7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LINC00346Q8IVM7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LINC00346Q8IVM7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
LINC00346Q8IVM7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.02■□□□□ 0.15
LINC00346Q8IVM7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LINC00346Q8IVM7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LINC00346Q8IVM7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LINC00346Q8IVM7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.02■□□□□ 0.15
LINC00346Q8IVM7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.02■□□□□ 0.15
LINC00346Q8IVM7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LINC00346Q8IVM7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LINC00346Q8IVM7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LINC00346Q8IVM7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LINC00346Q8IVM7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16■□□□□ 0.15
LINC00346Q8IVM7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LINC00346Q8IVM7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
LINC00346Q8IVM7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC00346Q8IVM7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
LINC00346Q8IVM7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC00346Q8IVM7 KRT18P22-201ENST00000402024 1347 ntBASIC16■□□□□ 0.15
LINC00346Q8IVM7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
LINC00346Q8IVM7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LINC00346Q8IVM7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC00346Q8IVM7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16■□□□□ 0.15
LINC00346Q8IVM7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LINC00346Q8IVM7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC00346Q8IVM7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC00346Q8IVM7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16■□□□□ 0.15
LINC00346Q8IVM7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC00346Q8IVM7 AC087499.1-201ENST00000418141 1075 ntBASIC16■□□□□ 0.15
LINC00346Q8IVM7 SLC25A6P5-201ENST00000435663 894 ntBASIC16■□□□□ 0.15
LINC00346Q8IVM7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16■□□□□ 0.15
LINC00346Q8IVM7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16■□□□□ 0.15
LINC00346Q8IVM7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16■□□□□ 0.15
LINC00346Q8IVM7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16■□□□□ 0.15
LINC00346Q8IVM7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
LINC00346Q8IVM7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16■□□□□ 0.15
LINC00346Q8IVM7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC00346Q8IVM7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
LINC00346Q8IVM7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC00346Q8IVM7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16■□□□□ 0.15
LINC00346Q8IVM7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC00346Q8IVM7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LINC00346Q8IVM7 LINC00896-202ENST00000609602 2128 ntBASIC16■□□□□ 0.15
LINC00346Q8IVM7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC00346Q8IVM7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
LINC00346Q8IVM7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16■□□□□ 0.15
LINC00346Q8IVM7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
LINC00346Q8IVM7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms