Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 RNA5SP416-201ENST00000516838 111 ntBASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 AC040169.1-201ENST00000565382 521 ntBASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 ESPNP-201ENST00000270691 2015 ntBASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.27■□□□□ 0.68
NPAS4Q8IUM7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPAS4Q8IUM7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
NPAS4Q8IUM7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPAS4Q8IUM7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NPAS4Q8IUM7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.27■□□□□ 0.68
NPAS4Q8IUM7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NPAS4Q8IUM7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.27■□□□□ 0.68
NPAS4Q8IUM7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.27■□□□□ 0.68
NPAS4Q8IUM7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.27■□□□□ 0.68
NPAS4Q8IUM7 AC055717.3-201ENST00000622967 595 ntBASIC19.27■□□□□ 0.68
NPAS4Q8IUM7 AD001527.2-201ENST00000622994 785 ntBASIC19.27■□□□□ 0.68
NPAS4Q8IUM7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPAS4Q8IUM7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.27■□□□□ 0.68
NPAS4Q8IUM7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
NPAS4Q8IUM7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
NPAS4Q8IUM7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NPAS4Q8IUM7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.27■□□□□ 0.67
NPAS4Q8IUM7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 YBX2P1-201ENST00000394192 760 ntBASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 RPSAP43-201ENST00000402237 625 ntBASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 GPX1P2-201ENST00000429271 606 ntBASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 AC009947.1-201ENST00000444350 727 ntBASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 DNAJB3-201ENST00000446806 729 ntBASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 AC010327.4-202ENST00000591484 748 ntBASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 AC006557.2-201ENST00000592985 1240 ntBASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 MIR1199-201ENST00000621445 119 ntBASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 AC010460.3-201ENST00000511359 1579 ntBASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NPAS4Q8IUM7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.25■□□□□ 0.67
NPAS4Q8IUM7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS4Q8IUM7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NPAS4Q8IUM7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.25■□□□□ 0.67
NPAS4Q8IUM7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS4Q8IUM7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS4Q8IUM7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS4Q8IUM7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS4Q8IUM7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS4Q8IUM7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS4Q8IUM7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NPAS4Q8IUM7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NPAS4Q8IUM7 KRT18P27-201ENST00000427733 1299 ntBASIC19.25■□□□□ 0.67
NPAS4Q8IUM7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.25■□□□□ 0.67
NPAS4Q8IUM7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.25■□□□□ 0.67
NPAS4Q8IUM7 PRYP5-201ENST00000451909 266 ntBASIC19.25■□□□□ 0.67
NPAS4Q8IUM7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.25■□□□□ 0.67
NPAS4Q8IUM7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS4Q8IUM7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS4Q8IUM7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS4Q8IUM7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS4Q8IUM7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NPAS4Q8IUM7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NPAS4Q8IUM7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms