Protein–RNA interactions for Protein: Q86TD4

SRL, Sarcalumenin, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRLQ86TD4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRLQ86TD4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SRLQ86TD4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRLQ86TD4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.12■□□□□ 0.65
SRLQ86TD4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SRLQ86TD4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRLQ86TD4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SRLQ86TD4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.12■□□□□ 0.65
SRLQ86TD4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRLQ86TD4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SRLQ86TD4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.12■□□□□ 0.65
SRLQ86TD4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.12■□□□□ 0.65
SRLQ86TD4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SRLQ86TD4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.12■□□□□ 0.65
SRLQ86TD4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRLQ86TD4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SRLQ86TD4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SRLQ86TD4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SRLQ86TD4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRLQ86TD4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRLQ86TD4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRLQ86TD4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRLQ86TD4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SRLQ86TD4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRLQ86TD4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRLQ86TD4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRLQ86TD4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRLQ86TD4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
SRLQ86TD4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRLQ86TD4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.11■□□□□ 0.65
SRLQ86TD4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.11■□□□□ 0.65
SRLQ86TD4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.11■□□□□ 0.65
SRLQ86TD4 SLC25A3P1-201ENST00000443844 931 ntBASIC19.11■□□□□ 0.65
SRLQ86TD4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.11■□□□□ 0.65
SRLQ86TD4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.11■□□□□ 0.65
SRLQ86TD4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
SRLQ86TD4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.11■□□□□ 0.65
SRLQ86TD4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRLQ86TD4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRLQ86TD4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRLQ86TD4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRLQ86TD4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SRLQ86TD4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRLQ86TD4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRLQ86TD4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRLQ86TD4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRLQ86TD4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRLQ86TD4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SRLQ86TD4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.1■□□□□ 0.65
SRLQ86TD4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SRLQ86TD4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRLQ86TD4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SRLQ86TD4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.1■□□□□ 0.65
SRLQ86TD4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRLQ86TD4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRLQ86TD4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SRLQ86TD4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SRLQ86TD4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRLQ86TD4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRLQ86TD4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRLQ86TD4 HMGA1P5-201ENST00000412453 271 ntBASIC19.1■□□□□ 0.65
SRLQ86TD4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRLQ86TD4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SRLQ86TD4 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.1■□□□□ 0.65
SRLQ86TD4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.1■□□□□ 0.65
SRLQ86TD4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
SRLQ86TD4 AC005363.2-201ENST00000618631 242 ntBASIC19.1■□□□□ 0.65
SRLQ86TD4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SRLQ86TD4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.1■□□□□ 0.65
SRLQ86TD4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRLQ86TD4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRLQ86TD4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SRLQ86TD4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SRLQ86TD4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.1■□□□□ 0.65
SRLQ86TD4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRLQ86TD4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.1■□□□□ 0.65
SRLQ86TD4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRLQ86TD4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRLQ86TD4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRLQ86TD4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SRLQ86TD4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRLQ86TD4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.09■□□□□ 0.65
SRLQ86TD4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRLQ86TD4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.09■□□□□ 0.65
SRLQ86TD4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SRLQ86TD4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.09■□□□□ 0.65
SRLQ86TD4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.09■□□□□ 0.65
SRLQ86TD4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SRLQ86TD4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRLQ86TD4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRLQ86TD4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.09■□□□□ 0.65
SRLQ86TD4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SRLQ86TD4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SRLQ86TD4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.09■□□□□ 0.65
SRLQ86TD4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.09■□□□□ 0.65
SRLQ86TD4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.09■□□□□ 0.65
SRLQ86TD4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.09■□□□□ 0.65
SRLQ86TD4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SRLQ86TD4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SRLQ86TD4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms