Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 AC091076.1-201ENST00000610741 619 ntBASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 HEIH-201ENST00000623091 1652 ntBASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 FLJ16779-201ENST00000612722 7638 ntBASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 RASA4DP-201ENST00000460726 1199 ntBASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 LINC01311-201ENST00000565162 1445 ntBASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 HOXB1-202ENST00000577092 1414 ntBASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CHMP1BQ7LBR1 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 AL031133.1-201ENST00000406807 723 ntBASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 AL121956.5-201ENST00000625261 221 ntBASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 AC006333.2-201ENST00000607957 2099 ntBASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms