Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TMEM88Q6PEY1 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 SLC29A4P1-201ENST00000398760 971 ntBASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 AF201337.1-201ENST00000520239 748 ntBASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 AC069236.1-201ENST00000604339 616 ntBASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM88Q6PEY1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 AC243732.1-201ENST00000612648 864 ntBASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 AC007950.2-201ENST00000615045 2347 ntBASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 AC079328.2-201ENST00000561241 3354 ntBASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.61□□□□□ -0.07
TMEM88Q6PEY1 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM88Q6PEY1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms