Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 AC103564.2-201ENST00000432853 1299 ntBASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 AC002310.6-201ENST00000624451 1377 ntBASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 KRT18P28-201ENST00000453838 1332 ntBASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 YBX1P5-201ENST00000509441 847 ntBASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 AL596442.2-201ENST00000610240 980 ntBASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.34■□□□□ 0.69
CNKSR3Q6P9H4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.33■□□□□ 0.69
CNKSR3Q6P9H4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNKSR3Q6P9H4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CNKSR3Q6P9H4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CNKSR3Q6P9H4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.33■□□□□ 0.69
CNKSR3Q6P9H4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.33■□□□□ 0.69
CNKSR3Q6P9H4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNKSR3Q6P9H4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNKSR3Q6P9H4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.33■□□□□ 0.68
CNKSR3Q6P9H4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.33■□□□□ 0.68
CNKSR3Q6P9H4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.33■□□□□ 0.68
CNKSR3Q6P9H4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CNKSR3Q6P9H4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CNKSR3Q6P9H4 AC073592.5-201ENST00000624854 528 ntBASIC19.33■□□□□ 0.68
CNKSR3Q6P9H4 AC005082.1-201ENST00000413042 2259 ntBASIC19.33■□□□□ 0.68
CNKSR3Q6P9H4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CNKSR3Q6P9H4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNKSR3Q6P9H4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNKSR3Q6P9H4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
CNKSR3Q6P9H4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNKSR3Q6P9H4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CNKSR3Q6P9H4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
CNKSR3Q6P9H4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.32■□□□□ 0.68
CNKSR3Q6P9H4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNKSR3Q6P9H4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CNKSR3Q6P9H4 AC005332.7-201ENST00000614046 2005 ntBASIC19.32■□□□□ 0.68
CNKSR3Q6P9H4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNKSR3Q6P9H4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNKSR3Q6P9H4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNKSR3Q6P9H4 CRYGEP-201ENST00000412192 528 ntBASIC19.32■□□□□ 0.68
CNKSR3Q6P9H4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.32■□□□□ 0.68
CNKSR3Q6P9H4 METTL21AP1-201ENST00000438852 635 ntBASIC19.32■□□□□ 0.68
CNKSR3Q6P9H4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.32■□□□□ 0.68
CNKSR3Q6P9H4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.32■□□□□ 0.68
CNKSR3Q6P9H4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CNKSR3Q6P9H4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.32■□□□□ 0.68
CNKSR3Q6P9H4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNKSR3Q6P9H4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.32■□□□□ 0.68
CNKSR3Q6P9H4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNKSR3Q6P9H4 AC004706.3-202ENST00000621574 984 ntBASIC19.32■□□□□ 0.68
CNKSR3Q6P9H4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNKSR3Q6P9H4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNKSR3Q6P9H4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNKSR3Q6P9H4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNKSR3Q6P9H4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
CNKSR3Q6P9H4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNKSR3Q6P9H4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CNKSR3Q6P9H4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNKSR3Q6P9H4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms