Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTCRAQ6ISU1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
PTCRAQ6ISU1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTCRAQ6ISU1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTCRAQ6ISU1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.51■□□□□ 0.55
PTCRAQ6ISU1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCRAQ6ISU1 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.5■□□□□ 0.55
PTCRAQ6ISU1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.5■□□□□ 0.55
PTCRAQ6ISU1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCRAQ6ISU1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.5■□□□□ 0.55
PTCRAQ6ISU1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTCRAQ6ISU1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCRAQ6ISU1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
PTCRAQ6ISU1 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTCRAQ6ISU1 MRPL20P1-201ENST00000400819 433 ntBASIC18.5■□□□□ 0.55
PTCRAQ6ISU1 PMS2P4-201ENST00000412466 1052 ntBASIC18.5■□□□□ 0.55
PTCRAQ6ISU1 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.5■□□□□ 0.55
PTCRAQ6ISU1 AC010654.1-201ENST00000615722 808 ntBASIC18.5■□□□□ 0.55
PTCRAQ6ISU1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.5■□□□□ 0.55
PTCRAQ6ISU1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PTCRAQ6ISU1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PTCRAQ6ISU1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PTCRAQ6ISU1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PTCRAQ6ISU1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
PTCRAQ6ISU1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 AC074386.1-202ENST00000463561 864 ntBASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 AC122714.2-201ENST00000502787 707 ntBASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 AC096734.2-201ENST00000562054 433 ntBASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 AC091812.2-201ENST00000619081 385 ntBASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 MYLKP1-201ENST00000509077 1580 ntBASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 LINC01126-201ENST00000623515 1646 ntBASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.49■□□□□ 0.55
PTCRAQ6ISU1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTCRAQ6ISU1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCRAQ6ISU1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.48■□□□□ 0.55
PTCRAQ6ISU1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
PTCRAQ6ISU1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.48■□□□□ 0.55
PTCRAQ6ISU1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTCRAQ6ISU1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTCRAQ6ISU1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PTCRAQ6ISU1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCRAQ6ISU1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCRAQ6ISU1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCRAQ6ISU1 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCRAQ6ISU1 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCRAQ6ISU1 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.48■□□□□ 0.55
PTCRAQ6ISU1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.48■□□□□ 0.55
PTCRAQ6ISU1 AC073592.5-201ENST00000624854 528 ntBASIC18.48■□□□□ 0.55
PTCRAQ6ISU1 LINC00628-201ENST00000628516 1289 ntBASIC18.48■□□□□ 0.55
PTCRAQ6ISU1 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.48■□□□□ 0.55
PTCRAQ6ISU1 AC105339.1-204ENST00000636249 355 ntBASIC18.48■□□□□ 0.55
PTCRAQ6ISU1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCRAQ6ISU1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCRAQ6ISU1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCRAQ6ISU1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.48■□□□□ 0.55
PTCRAQ6ISU1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.48■□□□□ 0.55
PTCRAQ6ISU1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTCRAQ6ISU1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.47■□□□□ 0.55
PTCRAQ6ISU1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.47■□□□□ 0.55
PTCRAQ6ISU1 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.47■□□□□ 0.55
PTCRAQ6ISU1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTCRAQ6ISU1 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.47■□□□□ 0.55
PTCRAQ6ISU1 AL020989.1-201ENST00000422979 469 ntBASIC18.47■□□□□ 0.55
PTCRAQ6ISU1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTCRAQ6ISU1 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.47■□□□□ 0.55
PTCRAQ6ISU1 AC093214.1-201ENST00000511688 1107 ntBASIC18.47■□□□□ 0.55
PTCRAQ6ISU1 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.47■□□□□ 0.55
PTCRAQ6ISU1 AC005225.4-201ENST00000557330 545 ntBASIC18.47■□□□□ 0.55
PTCRAQ6ISU1 AC093520.2-201ENST00000561830 333 ntBASIC18.47■□□□□ 0.55
PTCRAQ6ISU1 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.47■□□□□ 0.55
PTCRAQ6ISU1 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.47■□□□□ 0.55
PTCRAQ6ISU1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTCRAQ6ISU1 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTCRAQ6ISU1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTCRAQ6ISU1 NCF1C-201ENST00000438382 1427 ntBASIC18.47■□□□□ 0.55
PTCRAQ6ISU1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTCRAQ6ISU1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms