Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 AL096828.2-201ENST00000567259 1965 ntBASIC14.37□□□□□ -0.11
FAM78BQ5VT40 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 NKILA-202ENST00000614771 2598 ntBASIC14.37□□□□□ -0.11
FAM78BQ5VT40 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 HTR7P1-201ENST00000538670 1336 ntBASIC14.37□□□□□ -0.11
FAM78BQ5VT40 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 AC011676.5-201ENST00000624864 2660 ntBASIC14.37□□□□□ -0.11
FAM78BQ5VT40 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
FAM78BQ5VT40 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 AC239809.2-201ENST00000415381 517 ntBASIC14.36□□□□□ -0.11
FAM78BQ5VT40 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 AC006058.3-201ENST00000606217 1069 ntBASIC14.36□□□□□ -0.11
FAM78BQ5VT40 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 AL023875.1-201ENST00000640777 796 ntBASIC14.36□□□□□ -0.11
FAM78BQ5VT40 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FAM78BQ5VT40 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 GMCL1P1-201ENST00000463439 1581 ntBASIC14.35□□□□□ -0.11
FAM78BQ5VT40 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.35□□□□□ -0.11
FAM78BQ5VT40 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms