Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HERC4Q5GLZ8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HERC4Q5GLZ8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HERC4Q5GLZ8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.19■□□□□ 0.82
HERC4Q5GLZ8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HERC4Q5GLZ8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HERC4Q5GLZ8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HERC4Q5GLZ8 NOC2LP1-202ENST00000452600 2235 ntBASIC20.19■□□□□ 0.82
HERC4Q5GLZ8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HERC4Q5GLZ8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HERC4Q5GLZ8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HERC4Q5GLZ8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.19■□□□□ 0.82
HERC4Q5GLZ8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
HERC4Q5GLZ8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HERC4Q5GLZ8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
HERC4Q5GLZ8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
HERC4Q5GLZ8 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.19■□□□□ 0.82
HERC4Q5GLZ8 FAAHP1-202ENST00000446499 1238 ntBASIC20.19■□□□□ 0.82
HERC4Q5GLZ8 AC111152.3-201ENST00000569699 673 ntBASIC20.19■□□□□ 0.82
HERC4Q5GLZ8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.19■□□□□ 0.82
HERC4Q5GLZ8 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.19■□□□□ 0.82
HERC4Q5GLZ8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
HERC4Q5GLZ8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
HERC4Q5GLZ8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HERC4Q5GLZ8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HERC4Q5GLZ8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HERC4Q5GLZ8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HERC4Q5GLZ8 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.19■□□□□ 0.82
HERC4Q5GLZ8 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HERC4Q5GLZ8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
HERC4Q5GLZ8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.18■□□□□ 0.82
HERC4Q5GLZ8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.18■□□□□ 0.82
HERC4Q5GLZ8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HERC4Q5GLZ8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
HERC4Q5GLZ8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HERC4Q5GLZ8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HERC4Q5GLZ8 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HERC4Q5GLZ8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.18■□□□□ 0.82
HERC4Q5GLZ8 AL845331.1-201ENST00000424978 1190 ntBASIC20.18■□□□□ 0.82
HERC4Q5GLZ8 MIR3652-201ENST00000579335 131 ntBASIC20.18■□□□□ 0.82
HERC4Q5GLZ8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
HERC4Q5GLZ8 NPAP1P7-201ENST00000613027 823 ntBASIC20.18■□□□□ 0.82
HERC4Q5GLZ8 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.18■□□□□ 0.82
HERC4Q5GLZ8 AC083849.1-201ENST00000615227 514 ntBASIC20.18■□□□□ 0.82
HERC4Q5GLZ8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HERC4Q5GLZ8 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.18■□□□□ 0.82
HERC4Q5GLZ8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HERC4Q5GLZ8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
HERC4Q5GLZ8 AL391807.1-203ENST00000604392 2365 ntBASIC20.18■□□□□ 0.82
HERC4Q5GLZ8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.18■□□□□ 0.82
HERC4Q5GLZ8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HERC4Q5GLZ8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
HERC4Q5GLZ8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HERC4Q5GLZ8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HERC4Q5GLZ8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HERC4Q5GLZ8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 PRELID1P1-202ENST00000567272 903 ntBASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 AL136038.4-201ENST00000603606 1261 ntBASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
HERC4Q5GLZ8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
HERC4Q5GLZ8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HERC4Q5GLZ8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
HERC4Q5GLZ8 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HERC4Q5GLZ8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HERC4Q5GLZ8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.16■□□□□ 0.82
HERC4Q5GLZ8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
HERC4Q5GLZ8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HERC4Q5GLZ8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HERC4Q5GLZ8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HERC4Q5GLZ8 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HERC4Q5GLZ8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HERC4Q5GLZ8 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HERC4Q5GLZ8 AC092597.1-201ENST00000487352 616 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms