Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 TP73-AS1-210ENST00000637775 1455 ntBASIC20.69■□□□□ 0.9
USH1GQ495M9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
USH1GQ495M9 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
USH1GQ495M9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
USH1GQ495M9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USH1GQ495M9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.68■□□□□ 0.9
USH1GQ495M9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USH1GQ495M9 AC093010.1-201ENST00000473625 1624 ntBASIC20.68■□□□□ 0.9
USH1GQ495M9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USH1GQ495M9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USH1GQ495M9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USH1GQ495M9 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
USH1GQ495M9 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USH1GQ495M9 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USH1GQ495M9 RCN1P2-201ENST00000398357 915 ntBASIC20.68■□□□□ 0.9
USH1GQ495M9 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USH1GQ495M9 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
USH1GQ495M9 POM121L3P-201ENST00000419331 1163 ntBASIC20.68■□□□□ 0.9
USH1GQ495M9 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.68■□□□□ 0.9
USH1GQ495M9 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.68■□□□□ 0.9
USH1GQ495M9 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USH1GQ495M9 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.68■□□□□ 0.9
USH1GQ495M9 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.68■□□□□ 0.9
USH1GQ495M9 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.68■□□□□ 0.9
USH1GQ495M9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.68■□□□□ 0.9
USH1GQ495M9 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.68■□□□□ 0.9
USH1GQ495M9 AC114341.1-201ENST00000618070 349 ntBASIC20.68■□□□□ 0.9
USH1GQ495M9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USH1GQ495M9 AL138781.2-201ENST00000617896 1843 ntBASIC20.68■□□□□ 0.9
USH1GQ495M9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USH1GQ495M9 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
USH1GQ495M9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
USH1GQ495M9 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
USH1GQ495M9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USH1GQ495M9 AL096828.2-201ENST00000567259 1965 ntBASIC20.68■□□□□ 0.9
USH1GQ495M9 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USH1GQ495M9 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
USH1GQ495M9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.68■□□□□ 0.9
USH1GQ495M9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
USH1GQ495M9 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
USH1GQ495M9 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
USH1GQ495M9 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.67■□□□□ 0.9
USH1GQ495M9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USH1GQ495M9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USH1GQ495M9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USH1GQ495M9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USH1GQ495M9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
USH1GQ495M9 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USH1GQ495M9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USH1GQ495M9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USH1GQ495M9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
USH1GQ495M9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
USH1GQ495M9 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USH1GQ495M9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USH1GQ495M9 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.67■□□□□ 0.9
USH1GQ495M9 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
USH1GQ495M9 MIR5100-201ENST00000579544 119 ntBASIC20.67■□□□□ 0.9
USH1GQ495M9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.67■□□□□ 0.9
USH1GQ495M9 AL591684.3-201ENST00000605187 298 ntBASIC20.67■□□□□ 0.9
USH1GQ495M9 AL138831.2-201ENST00000606564 490 ntBASIC20.67■□□□□ 0.9
USH1GQ495M9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.67■□□□□ 0.9
USH1GQ495M9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
USH1GQ495M9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
USH1GQ495M9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
USH1GQ495M9 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.67■□□□□ 0.9
USH1GQ495M9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USH1GQ495M9 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.67■□□□□ 0.9
USH1GQ495M9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USH1GQ495M9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
USH1GQ495M9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USH1GQ495M9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
USH1GQ495M9 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USH1GQ495M9 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USH1GQ495M9 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.66■□□□□ 0.9
USH1GQ495M9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USH1GQ495M9 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USH1GQ495M9 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USH1GQ495M9 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
USH1GQ495M9 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USH1GQ495M9 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.66■□□□□ 0.9
USH1GQ495M9 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.66■□□□□ 0.9
USH1GQ495M9 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
USH1GQ495M9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USH1GQ495M9 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
USH1GQ495M9 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
USH1GQ495M9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USH1GQ495M9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USH1GQ495M9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
USH1GQ495M9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USH1GQ495M9 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
USH1GQ495M9 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USH1GQ495M9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USH1GQ495M9 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USH1GQ495M9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USH1GQ495M9 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.65■□□□□ 0.9
USH1GQ495M9 AC093677.2-201ENST00000600169 1863 ntBASIC20.65■□□□□ 0.9
USH1GQ495M9 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
USH1GQ495M9 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
USH1GQ495M9 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.65■□□□□ 0.9
USH1GQ495M9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms