Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFX4Q33E94 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RFX4Q33E94 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFX4Q33E94 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFX4Q33E94 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFX4Q33E94 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFX4Q33E94 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFX4Q33E94 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RFX4Q33E94 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFX4Q33E94 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RFX4Q33E94 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFX4Q33E94 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFX4Q33E94 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.83■□□□□ 0.28
RFX4Q33E94 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.83■□□□□ 0.28
RFX4Q33E94 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RFX4Q33E94 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.83■□□□□ 0.28
RFX4Q33E94 AC008040.2-201ENST00000461049 708 ntBASIC16.83■□□□□ 0.28
RFX4Q33E94 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.83■□□□□ 0.28
RFX4Q33E94 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFX4Q33E94 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFX4Q33E94 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RFX4Q33E94 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFX4Q33E94 AC011676.5-201ENST00000624864 2660 ntBASIC16.83■□□□□ 0.28
RFX4Q33E94 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.83■□□□□ 0.28
RFX4Q33E94 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.83■□□□□ 0.28
RFX4Q33E94 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.83■□□□□ 0.28
RFX4Q33E94 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFX4Q33E94 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RFX4Q33E94 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX4Q33E94 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX4Q33E94 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.82■□□□□ 0.28
RFX4Q33E94 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX4Q33E94 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
RFX4Q33E94 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.82■□□□□ 0.28
RFX4Q33E94 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX4Q33E94 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RFX4Q33E94 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RFX4Q33E94 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX4Q33E94 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.82■□□□□ 0.28
RFX4Q33E94 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX4Q33E94 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX4Q33E94 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.82■□□□□ 0.28
RFX4Q33E94 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RFX4Q33E94 FAM207BP-201ENST00000447172 505 ntBASIC16.82■□□□□ 0.28
RFX4Q33E94 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
RFX4Q33E94 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.82■□□□□ 0.28
RFX4Q33E94 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.82■□□□□ 0.28
RFX4Q33E94 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.82■□□□□ 0.28
RFX4Q33E94 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RFX4Q33E94 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.82■□□□□ 0.28
RFX4Q33E94 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX4Q33E94 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX4Q33E94 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX4Q33E94 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX4Q33E94 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFX4Q33E94 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.81■□□□□ 0.28
RFX4Q33E94 CROCCP1-201ENST00000426910 5675 ntBASIC16.81■□□□□ 0.28
RFX4Q33E94 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFX4Q33E94 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFX4Q33E94 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFX4Q33E94 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFX4Q33E94 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.81■□□□□ 0.28
RFX4Q33E94 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFX4Q33E94 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFX4Q33E94 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFX4Q33E94 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFX4Q33E94 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFX4Q33E94 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.81■□□□□ 0.28
RFX4Q33E94 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.81■□□□□ 0.28
RFX4Q33E94 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFX4Q33E94 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFX4Q33E94 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFX4Q33E94 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RFX4Q33E94 AC128676.1-201ENST00000454392 318 ntBASIC16.81■□□□□ 0.28
RFX4Q33E94 C1QBPP2-201ENST00000528754 825 ntBASIC16.81■□□□□ 0.28
RFX4Q33E94 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFX4Q33E94 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RFX4Q33E94 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
RFX4Q33E94 AL118508.1-201ENST00000613502 2345 ntBASIC16.81■□□□□ 0.28
RFX4Q33E94 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.81■□□□□ 0.28
RFX4Q33E94 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFX4Q33E94 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFX4Q33E94 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFX4Q33E94 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.8■□□□□ 0.28
RFX4Q33E94 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFX4Q33E94 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RFX4Q33E94 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFX4Q33E94 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFX4Q33E94 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFX4Q33E94 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFX4Q33E94 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.8■□□□□ 0.28
RFX4Q33E94 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFX4Q33E94 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFX4Q33E94 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFX4Q33E94 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
RFX4Q33E94 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFX4Q33E94 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.8■□□□□ 0.28
RFX4Q33E94 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RFX4Q33E94 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFX4Q33E94 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms