Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 GPAT2P1-201ENST00000444924 1672 ntBASIC13.86□□□□□ -0.19
HIST1H1AQ02539 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 AC116562.2-201ENST00000507042 360 ntBASIC13.86□□□□□ -0.19
HIST1H1AQ02539 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 AC233702.5-201ENST00000584107 538 ntBASIC13.86□□□□□ -0.19
HIST1H1AQ02539 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 AC026471.5-201ENST00000615068 467 ntBASIC13.86□□□□□ -0.19
HIST1H1AQ02539 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HIST1H1AQ02539 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 BAALC-201ENST00000297574 801 ntTSL 3 BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 REXO1L10P-201ENST00000615707 1290 ntBASIC13.85□□□□□ -0.19
HIST1H1AQ02539 REXO1L12P-201ENST00000622156 912 ntBASIC13.85□□□□□ -0.19
HIST1H1AQ02539 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 ESPNP-201ENST00000270691 2015 ntBASIC13.85□□□□□ -0.19
HIST1H1AQ02539 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.85□□□□□ -0.19
HIST1H1AQ02539 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H1AQ02539 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H1AQ02539 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H1AQ02539 PXK-206ENST00000463280 2825 ntTSL 2 BASIC13.84□□□□□ -0.19
HIST1H1AQ02539 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H1AQ02539 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H1AQ02539 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.84□□□□□ -0.19
HIST1H1AQ02539 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H1AQ02539 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H1AQ02539 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.84□□□□□ -0.19
HIST1H1AQ02539 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H1AQ02539 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.84□□□□□ -0.19
HIST1H1AQ02539 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H1AQ02539 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H1AQ02539 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.84□□□□□ -0.19
HIST1H1AQ02539 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC13.84□□□□□ -0.19
HIST1H1AQ02539 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.84□□□□□ -0.19
HIST1H1AQ02539 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H1AQ02539 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H1AQ02539 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H1AQ02539 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H1AQ02539 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
HIST1H1AQ02539 AC135776.1-201ENST00000319817 2481 ntBASIC13.84□□□□□ -0.19
HIST1H1AQ02539 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST1H1AQ02539 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms