Protein–RNA interactions for Protein: P98179

RBM3, RNA-binding protein 3, humanhuman

Known RBP Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3P98179 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RBM3P98179 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RBM3P98179 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC11.41□□□□□ -0.58
RBM3P98179 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC11.41□□□□□ -0.58
RBM3P98179 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RBM3P98179 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC11.41□□□□□ -0.58
RBM3P98179 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
RBM3P98179 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
RBM3P98179 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RBM3P98179 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RBM3P98179 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RBM3P98179 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RBM3P98179 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RBM3P98179 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RBM3P98179 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
RBM3P98179 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
RBM3P98179 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RBM3P98179 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
RBM3P98179 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC11.41□□□□□ -0.58
RBM3P98179 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RBM3P98179 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
RBM3P98179 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC11.4□□□□□ -0.58
RBM3P98179 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RBM3P98179 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.58
RBM3P98179 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RBM3P98179 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RBM3P98179 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RBM3P98179 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RBM3P98179 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RBM3P98179 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
RBM3P98179 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
RBM3P98179 AC097376.2-205ENST00000610159 5334 ntBASIC11.4□□□□□ -0.58
RBM3P98179 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RBM3P98179 DOC2GP-204ENST00000639052 2548 ntBASIC11.4□□□□□ -0.58
RBM3P98179 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
RBM3P98179 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RBM3P98179 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC11.4□□□□□ -0.58
RBM3P98179 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC11.4□□□□□ -0.58
RBM3P98179 EBPL-204ENST00000378272 766 ntTSL 3 BASIC11.4□□□□□ -0.58
RBM3P98179 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
RBM3P98179 KRT18P68-201ENST00000392293 1000 ntBASIC11.4□□□□□ -0.58
RBM3P98179 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RBM3P98179 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
RBM3P98179 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC11.4□□□□□ -0.58
RBM3P98179 TESC-206ENST00000541210 936 ntTSL 3 BASIC11.4□□□□□ -0.58
RBM3P98179 AL162412.1-201ENST00000567129 965 ntBASIC11.4□□□□□ -0.58
RBM3P98179 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
RBM3P98179 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RBM3P98179 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RBM3P98179 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC11.4□□□□□ -0.58
RBM3P98179 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC11.4□□□□□ -0.58
RBM3P98179 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RBM3P98179 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
RBM3P98179 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC11.4□□□□□ -0.58
RBM3P98179 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RBM3P98179 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RBM3P98179 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
RBM3P98179 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC11.4□□□□□ -0.59
RBM3P98179 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
RBM3P98179 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
RBM3P98179 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
RBM3P98179 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
RBM3P98179 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
RBM3P98179 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
RBM3P98179 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC11.39□□□□□ -0.59
RBM3P98179 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RBM3P98179 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
RBM3P98179 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC11.39□□□□□ -0.59
RBM3P98179 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RBM3P98179 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RBM3P98179 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RBM3P98179 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RBM3P98179 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC11.39□□□□□ -0.59
RBM3P98179 AC135279.3-201ENST00000610945 1311 ntBASIC11.39□□□□□ -0.59
RBM3P98179 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RBM3P98179 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RBM3P98179 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RBM3P98179 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
RBM3P98179 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RBM3P98179 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC11.39□□□□□ -0.59
RBM3P98179 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RBM3P98179 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RBM3P98179 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RBM3P98179 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
RBM3P98179 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RBM3P98179 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
RBM3P98179 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC11.39□□□□□ -0.59
RBM3P98179 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RBM3P98179 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
RBM3P98179 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RBM3P98179 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RBM3P98179 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
RBM3P98179 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC11.39□□□□□ -0.59
RBM3P98179 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC11.39□□□□□ -0.59
RBM3P98179 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RBM3P98179 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC11.39□□□□□ -0.59
RBM3P98179 DKFZP434A062-201ENST00000573103 5021 ntBASIC11.39□□□□□ -0.59
RBM3P98179 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RBM3P98179 AC006116.8-202ENST00000587620 1550 ntBASIC11.39□□□□□ -0.59
RBM3P98179 AL136162.1-201ENST00000607711 1078 ntBASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms