Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CL1P78423 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.58□□□□□ -0.08
CX3CL1P78423 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CL1P78423 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CL1P78423 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
CX3CL1P78423 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CL1P78423 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CX3CL1P78423 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CX3CL1P78423 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CL1P78423 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
CX3CL1P78423 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CL1P78423 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CL1P78423 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CX3CL1P78423 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CL1P78423 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CL1P78423 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CX3CL1P78423 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CX3CL1P78423 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CL1P78423 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CL1P78423 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CL1P78423 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CX3CL1P78423 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CL1P78423 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
CX3CL1P78423 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.57□□□□□ -0.08
CX3CL1P78423 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CX3CL1P78423 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CL1P78423 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CL1P78423 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.57□□□□□ -0.08
CX3CL1P78423 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CX3CL1P78423 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CX3CL1P78423 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CL1P78423 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.57□□□□□ -0.08
CX3CL1P78423 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CL1P78423 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CL1P78423 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.57□□□□□ -0.08
CX3CL1P78423 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.57□□□□□ -0.08
CX3CL1P78423 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CL1P78423 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.57□□□□□ -0.08
CX3CL1P78423 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.57□□□□□ -0.08
CX3CL1P78423 MIR3917-201ENST00000580971 93 ntBASIC14.57□□□□□ -0.08
CX3CL1P78423 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CX3CL1P78423 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.57□□□□□ -0.08
CX3CL1P78423 AC011558.1-201ENST00000623459 338 ntBASIC14.57□□□□□ -0.08
CX3CL1P78423 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.57□□□□□ -0.08
CX3CL1P78423 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.57□□□□□ -0.08
CX3CL1P78423 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.57□□□□□ -0.08
CX3CL1P78423 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CL1P78423 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CL1P78423 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CX3CL1P78423 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CX3CL1P78423 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CL1P78423 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CL1P78423 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CL1P78423 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CX3CL1P78423 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CL1P78423 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CL1P78423 GMCL1P1-201ENST00000463439 1581 ntBASIC14.56□□□□□ -0.08
CX3CL1P78423 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CL1P78423 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.56□□□□□ -0.08
CX3CL1P78423 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CL1P78423 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CL1P78423 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CL1P78423 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.56□□□□□ -0.08
CX3CL1P78423 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CL1P78423 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CL1P78423 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CL1P78423 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CL1P78423 YBX1P2-201ENST00000489612 999 ntBASIC14.56□□□□□ -0.08
CX3CL1P78423 AC034232.1-201ENST00000506026 1064 ntBASIC14.56□□□□□ -0.08
CX3CL1P78423 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.56□□□□□ -0.08
CX3CL1P78423 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.56□□□□□ -0.08
CX3CL1P78423 AL441883.1-201ENST00000566170 1045 ntBASIC14.56□□□□□ -0.08
CX3CL1P78423 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.56□□□□□ -0.08
CX3CL1P78423 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CL1P78423 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CX3CL1P78423 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CL1P78423 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CL1P78423 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.56□□□□□ -0.08
CX3CL1P78423 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CL1P78423 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CL1P78423 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CL1P78423 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CL1P78423 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CL1P78423 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CL1P78423 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.55□□□□□ -0.08
CX3CL1P78423 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CL1P78423 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CL1P78423 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.55□□□□□ -0.08
CX3CL1P78423 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.55□□□□□ -0.08
CX3CL1P78423 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CL1P78423 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CX3CL1P78423 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CL1P78423 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CX3CL1P78423 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
CX3CL1P78423 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CL1P78423 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CL1P78423 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
CX3CL1P78423 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CL1P78423 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CL1P78423 AC117947.1-201ENST00000427448 529 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms