Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H3AP68431 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.8■□□□□ 0.12
HIST1H3AP68431 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H3AP68431 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H3AP68431 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
HIST1H3AP68431 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.79■□□□□ 0.12
HIST1H3AP68431 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.79■□□□□ 0.12
HIST1H3AP68431 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H3AP68431 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H3AP68431 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.79■□□□□ 0.12
HIST1H3AP68431 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.79■□□□□ 0.12
HIST1H3AP68431 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H3AP68431 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HIST1H3AP68431 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.79■□□□□ 0.12
HIST1H3AP68431 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H3AP68431 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H3AP68431 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H3AP68431 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H3AP68431 HOMER2P1-201ENST00000455653 964 ntBASIC15.79■□□□□ 0.12
HIST1H3AP68431 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H3AP68431 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H3AP68431 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.79■□□□□ 0.12
HIST1H3AP68431 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.79■□□□□ 0.12
HIST1H3AP68431 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.79■□□□□ 0.12
HIST1H3AP68431 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
HIST1H3AP68431 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H3AP68431 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.79■□□□□ 0.12
HIST1H3AP68431 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H3AP68431 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HIST1H3AP68431 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H3AP68431 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
HIST1H3AP68431 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H3AP68431 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H3AP68431 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H3AP68431 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HIST1H3AP68431 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HIST1H3AP68431 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.78■□□□□ 0.12
HIST1H3AP68431 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
HIST1H3AP68431 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H3AP68431 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.78■□□□□ 0.12
HIST1H3AP68431 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H3AP68431 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H3AP68431 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.78■□□□□ 0.12
HIST1H3AP68431 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H3AP68431 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.78■□□□□ 0.12
HIST1H3AP68431 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H3AP68431 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
HIST1H3AP68431 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.78■□□□□ 0.12
HIST1H3AP68431 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H3AP68431 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.78■□□□□ 0.12
HIST1H3AP68431 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H3AP68431 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H3AP68431 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.78■□□□□ 0.12
HIST1H3AP68431 AC022898.2-201ENST00000616822 1312 ntBASIC15.78■□□□□ 0.12
HIST1H3AP68431 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.78■□□□□ 0.12
HIST1H3AP68431 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H3AP68431 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H3AP68431 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H3AP68431 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.78■□□□□ 0.12
HIST1H3AP68431 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
HIST1H3AP68431 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H3AP68431 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H3AP68431 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.78■□□□□ 0.12
HIST1H3AP68431 KRT18P57-201ENST00000443599 1254 ntBASIC15.78■□□□□ 0.12
HIST1H3AP68431 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.78■□□□□ 0.12
HIST1H3AP68431 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.78■□□□□ 0.12
HIST1H3AP68431 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.78■□□□□ 0.12
HIST1H3AP68431 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H3AP68431 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.78■□□□□ 0.12
HIST1H3AP68431 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.78■□□□□ 0.12
HIST1H3AP68431 LINC00602-201ENST00000629776 2065 ntBASIC15.78■□□□□ 0.12
HIST1H3AP68431 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H3AP68431 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H3AP68431 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H3AP68431 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H3AP68431 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H3AP68431 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H3AP68431 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HIST1H3AP68431 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HIST1H3AP68431 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
HIST1H3AP68431 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.78■□□□□ 0.12
HIST1H3AP68431 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H3AP68431 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H3AP68431 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
HIST1H3AP68431 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
HIST1H3AP68431 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST1H3AP68431 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.77■□□□□ 0.12
HIST1H3AP68431 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
HIST1H3AP68431 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST1H3AP68431 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST1H3AP68431 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.77■□□□□ 0.12
HIST1H3AP68431 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HIST1H3AP68431 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HIST1H3AP68431 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST1H3AP68431 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST1H3AP68431 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.77■□□□□ 0.12
HIST1H3AP68431 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
HIST1H3AP68431 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST1H3AP68431 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
HIST1H3AP68431 KRT18P38-201ENST00000449496 1282 ntBASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms