Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.16■□□□□ 0.5
AP1S1P61966 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.16■□□□□ 0.5
AP1S1P61966 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.16■□□□□ 0.5
AP1S1P61966 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP1S1P61966 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP1S1P61966 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.16■□□□□ 0.5
AP1S1P61966 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP1S1P61966 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP1S1P61966 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
AP1S1P61966 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP1S1P61966 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP1S1P61966 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP1S1P61966 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP1S1P61966 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP1S1P61966 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S1P61966 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S1P61966 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S1P61966 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S1P61966 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S1P61966 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S1P61966 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.15■□□□□ 0.5
AP1S1P61966 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S1P61966 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S1P61966 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S1P61966 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S1P61966 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
AP1S1P61966 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.15■□□□□ 0.5
AP1S1P61966 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S1P61966 HCG4P8-203ENST00000443049 980 ntBASIC18.15■□□□□ 0.5
AP1S1P61966 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
AP1S1P61966 TOB2P1-201ENST00000469761 992 ntBASIC18.15■□□□□ 0.5
AP1S1P61966 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.15■□□□□ 0.5
AP1S1P61966 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.15■□□□□ 0.5
AP1S1P61966 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S1P61966 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.15■□□□□ 0.5
AP1S1P61966 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S1P61966 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
AP1S1P61966 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S1P61966 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S1P61966 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S1P61966 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
AP1S1P61966 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S1P61966 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S1P61966 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S1P61966 AC233702.3-201ENST00000578656 1387 ntBASIC18.15■□□□□ 0.5
AP1S1P61966 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
AP1S1P61966 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S1P61966 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S1P61966 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
AP1S1P61966 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP1S1P61966 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
AP1S1P61966 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.14■□□□□ 0.5
AP1S1P61966 AC138028.4-201ENST00000564984 1845 ntBASIC18.14■□□□□ 0.5
AP1S1P61966 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S1P61966 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S1P61966 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
AP1S1P61966 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S1P61966 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.14■□□□□ 0.49
AP1S1P61966 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S1P61966 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.14■□□□□ 0.49
AP1S1P61966 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S1P61966 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S1P61966 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S1P61966 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S1P61966 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S1P61966 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S1P61966 AL845331.1-201ENST00000424978 1190 ntBASIC18.14■□□□□ 0.49
AP1S1P61966 LINC00265-3P-201ENST00000447588 903 ntBASIC18.14■□□□□ 0.49
AP1S1P61966 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.14■□□□□ 0.49
AP1S1P61966 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.14■□□□□ 0.49
AP1S1P61966 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.14■□□□□ 0.49
AP1S1P61966 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
AP1S1P61966 Z69720.1-201ENST00000601483 472 ntBASIC18.14■□□□□ 0.49
AP1S1P61966 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S1P61966 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S1P61966 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.14■□□□□ 0.49
AP1S1P61966 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S1P61966 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.14■□□□□ 0.49
AP1S1P61966 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S1P61966 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S1P61966 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.14■□□□□ 0.49
AP1S1P61966 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S1P61966 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.14■□□□□ 0.49
AP1S1P61966 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.14■□□□□ 0.49
AP1S1P61966 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
AP1S1P61966 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.14■□□□□ 0.49
AP1S1P61966 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S1P61966 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP1S1P61966 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
AP1S1P61966 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
AP1S1P61966 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S1P61966 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
AP1S1P61966 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
AP1S1P61966 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S1P61966 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.13■□□□□ 0.49
AP1S1P61966 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
AP1S1P61966 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AP1S1P61966 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.13■□□□□ 0.49
AP1S1P61966 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
AP1S1P61966 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms