Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB5BP61020 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB5BP61020 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB5BP61020 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB5BP61020 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB5BP61020 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB5BP61020 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB5BP61020 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB5BP61020 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB5BP61020 AC005224.4-201ENST00000583262 1652 ntBASIC14.17□□□□□ -0.14
RAB5BP61020 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB5BP61020 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB5BP61020 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB5BP61020 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB5BP61020 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB5BP61020 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RAB5BP61020 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.16□□□□□ -0.14
RAB5BP61020 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RAB5BP61020 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RAB5BP61020 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.16□□□□□ -0.14
RAB5BP61020 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC14.16□□□□□ -0.14
RAB5BP61020 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB5BP61020 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.16□□□□□ -0.14
RAB5BP61020 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB5BP61020 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RAB5BP61020 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5BP61020 KRT8P17-201ENST00000453110 1448 ntBASIC14.15□□□□□ -0.14
RAB5BP61020 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
RAB5BP61020 AC093010.1-201ENST00000473625 1624 ntBASIC14.15□□□□□ -0.14
RAB5BP61020 FEM1AP3-201ENST00000403722 1741 ntBASIC14.15□□□□□ -0.14
RAB5BP61020 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5BP61020 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RAB5BP61020 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB5BP61020 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
RAB5BP61020 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5BP61020 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB5BP61020 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RAB5BP61020 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5BP61020 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5BP61020 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB5BP61020 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5BP61020 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB5BP61020 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5BP61020 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5BP61020 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5BP61020 LSM4-201ENST00000252816 986 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB5BP61020 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RAB5BP61020 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB5BP61020 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5BP61020 GRAMD4P7-201ENST00000578182 1232 ntBASIC14.15□□□□□ -0.14
RAB5BP61020 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB5BP61020 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5BP61020 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5BP61020 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5BP61020 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5BP61020 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5BP61020 CYP2T1P-202ENST00000641596 2535 ntBASIC14.15□□□□□ -0.14
RAB5BP61020 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5BP61020 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB5BP61020 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5BP61020 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB5BP61020 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5BP61020 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5BP61020 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5BP61020 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5BP61020 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5BP61020 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
RAB5BP61020 AC006449.5-201ENST00000610658 2098 ntBASIC14.14□□□□□ -0.15
RAB5BP61020 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.14□□□□□ -0.15
RAB5BP61020 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5BP61020 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RAB5BP61020 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms