Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN12P56749 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN12P56749 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN12P56749 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN12P56749 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN12P56749 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN12P56749 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN12P56749 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN12P56749 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN12P56749 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN12P56749 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN12P56749 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
CLDN12P56749 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN12P56749 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN12P56749 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN12P56749 KRT18P55-202ENST00000578578 1546 ntBASIC15.74■□□□□ 0.11
CLDN12P56749 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.74■□□□□ 0.11
CLDN12P56749 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
CLDN12P56749 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.74■□□□□ 0.11
CLDN12P56749 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
CLDN12P56749 LINC00602-201ENST00000629776 2065 ntBASIC15.74■□□□□ 0.11
CLDN12P56749 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN12P56749 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN12P56749 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CLDN12P56749 GPAT2P1-201ENST00000444924 1672 ntBASIC15.74■□□□□ 0.11
CLDN12P56749 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN12P56749 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.74■□□□□ 0.11
CLDN12P56749 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN12P56749 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN12P56749 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN12P56749 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN12P56749 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
CLDN12P56749 AL023284.2-201ENST00000405850 579 ntBASIC15.74■□□□□ 0.11
CLDN12P56749 FAM207BP-201ENST00000447172 505 ntBASIC15.74■□□□□ 0.11
CLDN12P56749 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
CLDN12P56749 AC142086.2-201ENST00000569753 217 ntBASIC15.74■□□□□ 0.11
CLDN12P56749 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CLDN12P56749 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN12P56749 AC034236.2-201ENST00000606662 1610 ntBASIC15.74■□□□□ 0.11
CLDN12P56749 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN12P56749 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN12P56749 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN12P56749 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CLDN12P56749 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.74■□□□□ 0.11
CLDN12P56749 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN12P56749 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN12P56749 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN12P56749 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN12P56749 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN12P56749 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN12P56749 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN12P56749 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN12P56749 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN12P56749 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN12P56749 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN12P56749 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN12P56749 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN12P56749 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN12P56749 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN12P56749 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN12P56749 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CLDN12P56749 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
CLDN12P56749 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.73■□□□□ 0.11
CLDN12P56749 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN12P56749 AC124016.1-201ENST00000609552 612 ntBASIC15.73■□□□□ 0.11
CLDN12P56749 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN12P56749 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN12P56749 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CLDN12P56749 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN12P56749 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN12P56749 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN12P56749 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN12P56749 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN12P56749 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CLDN12P56749 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.73■□□□□ 0.11
CLDN12P56749 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CLDN12P56749 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN12P56749 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CLDN12P56749 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN12P56749 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CLDN12P56749 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN12P56749 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN12P56749 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN12P56749 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN12P56749 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN12P56749 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN12P56749 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
CLDN12P56749 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN12P56749 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN12P56749 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.72■□□□□ 0.11
CLDN12P56749 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.72■□□□□ 0.11
CLDN12P56749 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN12P56749 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN12P56749 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN12P56749 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN12P56749 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN12P56749 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN12P56749 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN12P56749 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLDN12P56749 MCCD1P1-208ENST00000445732 328 ntBASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms