Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PKNOX1P55347 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PKNOX1P55347 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PKNOX1P55347 FITM1-202ENST00000559294 800 ntBASIC17.74■□□□□ 0.43
PKNOX1P55347 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.74■□□□□ 0.43
PKNOX1P55347 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PKNOX1P55347 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PKNOX1P55347 AC116562.4-202ENST00000641738 218 ntBASIC17.74■□□□□ 0.43
PKNOX1P55347 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PKNOX1P55347 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PKNOX1P55347 AC108860.2-201ENST00000562760 2183 ntBASIC17.74■□□□□ 0.43
PKNOX1P55347 AC084018.2-201ENST00000613093 2607 ntBASIC17.74■□□□□ 0.43
PKNOX1P55347 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.74■□□□□ 0.43
PKNOX1P55347 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PKNOX1P55347 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
PKNOX1P55347 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PKNOX1P55347 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PKNOX1P55347 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PKNOX1P55347 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PKNOX1P55347 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PKNOX1P55347 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PKNOX1P55347 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
PKNOX1P55347 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.73■□□□□ 0.43
PKNOX1P55347 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PKNOX1P55347 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PKNOX1P55347 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PKNOX1P55347 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PKNOX1P55347 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PKNOX1P55347 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PKNOX1P55347 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PKNOX1P55347 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.73■□□□□ 0.43
PKNOX1P55347 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PKNOX1P55347 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
PKNOX1P55347 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PKNOX1P55347 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.73■□□□□ 0.43
PKNOX1P55347 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.73■□□□□ 0.43
PKNOX1P55347 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PKNOX1P55347 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.73■□□□□ 0.43
PKNOX1P55347 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PKNOX1P55347 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.73■□□□□ 0.43
PKNOX1P55347 AC104390.1-201ENST00000555663 520 ntBASIC17.73■□□□□ 0.43
PKNOX1P55347 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.73■□□□□ 0.43
PKNOX1P55347 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.73■□□□□ 0.43
PKNOX1P55347 AC112497.1-201ENST00000624824 639 ntBASIC17.73■□□□□ 0.43
PKNOX1P55347 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
PKNOX1P55347 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PKNOX1P55347 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PKNOX1P55347 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
PKNOX1P55347 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.73■□□□□ 0.43
PKNOX1P55347 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.73■□□□□ 0.43
PKNOX1P55347 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PKNOX1P55347 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PKNOX1P55347 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PKNOX1P55347 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
PKNOX1P55347 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PKNOX1P55347 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PKNOX1P55347 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PKNOX1P55347 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PKNOX1P55347 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.72■□□□□ 0.43
PKNOX1P55347 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PKNOX1P55347 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.72■□□□□ 0.43
PKNOX1P55347 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PKNOX1P55347 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PKNOX1P55347 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
PKNOX1P55347 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PKNOX1P55347 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PKNOX1P55347 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PKNOX1P55347 AC008550.1-201ENST00000511500 884 ntBASIC17.72■□□□□ 0.43
PKNOX1P55347 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
PKNOX1P55347 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.72■□□□□ 0.43
PKNOX1P55347 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PKNOX1P55347 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PKNOX1P55347 PP12613-201ENST00000424958 2230 ntBASIC17.72■□□□□ 0.43
PKNOX1P55347 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PKNOX1P55347 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.72■□□□□ 0.43
PKNOX1P55347 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PKNOX1P55347 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PKNOX1P55347 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PKNOX1P55347 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
PKNOX1P55347 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PKNOX1P55347 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PKNOX1P55347 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PKNOX1P55347 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PKNOX1P55347 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PKNOX1P55347 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKNOX1P55347 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKNOX1P55347 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKNOX1P55347 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PKNOX1P55347 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKNOX1P55347 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PKNOX1P55347 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.71■□□□□ 0.43
PKNOX1P55347 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.71■□□□□ 0.43
PKNOX1P55347 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PKNOX1P55347 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.71■□□□□ 0.43
PKNOX1P55347 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKNOX1P55347 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKNOX1P55347 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKNOX1P55347 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKNOX1P55347 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.71■□□□□ 0.43
PKNOX1P55347 AC007663.1-201ENST00000438948 1240 ntBASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms