Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXG1P55316 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.82■□□□□ 0.12
FOXG1P55316 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXG1P55316 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXG1P55316 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.82■□□□□ 0.12
FOXG1P55316 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
FOXG1P55316 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.82■□□□□ 0.12
FOXG1P55316 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.82■□□□□ 0.12
FOXG1P55316 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FOXG1P55316 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXG1P55316 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FOXG1P55316 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXG1P55316 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
FOXG1P55316 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
FOXG1P55316 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.82■□□□□ 0.12
FOXG1P55316 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.82■□□□□ 0.12
FOXG1P55316 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXG1P55316 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
FOXG1P55316 ABALON-201ENST00000629058 1903 ntBASIC15.82■□□□□ 0.12
FOXG1P55316 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXG1P55316 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
FOXG1P55316 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.82■□□□□ 0.12
FOXG1P55316 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.82■□□□□ 0.12
FOXG1P55316 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXG1P55316 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
FOXG1P55316 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.82■□□□□ 0.12
FOXG1P55316 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXG1P55316 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
FOXG1P55316 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
FOXG1P55316 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXG1P55316 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FOXG1P55316 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
FOXG1P55316 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FOXG1P55316 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXG1P55316 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXG1P55316 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXG1P55316 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXG1P55316 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXG1P55316 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.81■□□□□ 0.12
FOXG1P55316 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.81■□□□□ 0.12
FOXG1P55316 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXG1P55316 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.81■□□□□ 0.12
FOXG1P55316 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXG1P55316 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.81■□□□□ 0.12
FOXG1P55316 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.81■□□□□ 0.12
FOXG1P55316 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.81■□□□□ 0.12
FOXG1P55316 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.81■□□□□ 0.12
FOXG1P55316 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.81■□□□□ 0.12
FOXG1P55316 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.81■□□□□ 0.12
FOXG1P55316 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.81■□□□□ 0.12
FOXG1P55316 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.81■□□□□ 0.12
FOXG1P55316 AC100803.2-201ENST00000562459 1963 ntBASIC15.81■□□□□ 0.12
FOXG1P55316 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FOXG1P55316 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.81■□□□□ 0.12
FOXG1P55316 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
FOXG1P55316 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXG1P55316 AL353801.3-201ENST00000609898 542 ntBASIC15.81■□□□□ 0.12
FOXG1P55316 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FOXG1P55316 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.81■□□□□ 0.12
FOXG1P55316 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.81■□□□□ 0.12
FOXG1P55316 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
FOXG1P55316 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.81■□□□□ 0.12
FOXG1P55316 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXG1P55316 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
FOXG1P55316 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXG1P55316 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXG1P55316 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXG1P55316 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXG1P55316 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
FOXG1P55316 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
FOXG1P55316 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXG1P55316 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXG1P55316 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXG1P55316 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.8■□□□□ 0.12
FOXG1P55316 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXG1P55316 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXG1P55316 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXG1P55316 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXG1P55316 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXG1P55316 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXG1P55316 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXG1P55316 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXG1P55316 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
FOXG1P55316 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXG1P55316 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXG1P55316 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXG1P55316 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXG1P55316 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXG1P55316 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXG1P55316 IGHV3-47-201ENST00000425060 335 ntBASIC15.8■□□□□ 0.12
FOXG1P55316 DUSP5P1-201ENST00000441325 1139 ntBASIC15.8■□□□□ 0.12
FOXG1P55316 AC112698.1-201ENST00000510299 916 ntBASIC15.8■□□□□ 0.12
FOXG1P55316 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.8■□□□□ 0.12
FOXG1P55316 AC074051.2-201ENST00000565115 352 ntBASIC15.8■□□□□ 0.12
FOXG1P55316 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXG1P55316 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
FOXG1P55316 AC005336.2-201ENST00000593183 939 ntBASIC15.8■□□□□ 0.12
FOXG1P55316 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXG1P55316 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.8■□□□□ 0.12
FOXG1P55316 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms