Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMSP52788 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.95■□□□□ 0.3
SMSP52788 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMSP52788 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMSP52788 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SMSP52788 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.95■□□□□ 0.3
SMSP52788 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMSP52788 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMSP52788 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMSP52788 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.95■□□□□ 0.3
SMSP52788 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
SMSP52788 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMSP52788 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.95■□□□□ 0.3
SMSP52788 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
SMSP52788 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMSP52788 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMSP52788 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMSP52788 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
SMSP52788 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMSP52788 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMSP52788 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
SMSP52788 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.95■□□□□ 0.3
SMSP52788 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMSP52788 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMSP52788 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMSP52788 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.95■□□□□ 0.3
SMSP52788 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMSP52788 ESPNP-201ENST00000270691 2015 ntBASIC16.94■□□□□ 0.3
SMSP52788 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.94■□□□□ 0.3
SMSP52788 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SMSP52788 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SMSP52788 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SMSP52788 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMSP52788 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMSP52788 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMSP52788 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMSP52788 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SMSP52788 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
SMSP52788 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMSP52788 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
SMSP52788 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.94■□□□□ 0.3
SMSP52788 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.94■□□□□ 0.3
SMSP52788 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.94■□□□□ 0.3
SMSP52788 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.94■□□□□ 0.3
SMSP52788 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMSP52788 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMSP52788 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMSP52788 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMSP52788 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SMSP52788 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMSP52788 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
SMSP52788 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SMSP52788 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMSP52788 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMSP52788 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMSP52788 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.94■□□□□ 0.3
SMSP52788 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SMSP52788 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.93■□□□□ 0.3
SMSP52788 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
SMSP52788 AC012313.1-201ENST00000593393 3059 ntBASIC16.93■□□□□ 0.3
SMSP52788 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SMSP52788 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
SMSP52788 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMSP52788 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMSP52788 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMSP52788 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMSP52788 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.93■□□□□ 0.3
SMSP52788 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMSP52788 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.93■□□□□ 0.3
SMSP52788 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.93■□□□□ 0.3
SMSP52788 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.93■□□□□ 0.3
SMSP52788 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMSP52788 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.93■□□□□ 0.3
SMSP52788 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.93■□□□□ 0.3
SMSP52788 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.93■□□□□ 0.3
SMSP52788 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMSP52788 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMSP52788 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SMSP52788 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
SMSP52788 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SMSP52788 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMSP52788 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.93■□□□□ 0.3
SMSP52788 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.93■□□□□ 0.3
SMSP52788 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMSP52788 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.93■□□□□ 0.3
SMSP52788 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMSP52788 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SMSP52788 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMSP52788 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SMSP52788 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMSP52788 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMSP52788 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMSP52788 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMSP52788 GNAS-203ENST00000306120 1878 ntBASIC16.93■□□□□ 0.3
SMSP52788 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMSP52788 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMSP52788 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.92■□□□□ 0.3
SMSP52788 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SMSP52788 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMSP52788 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms