Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 JPX-211ENST00000602985 476 ntTSL 37.22□□□□□ -1.257e-8■□□□□ 11.3
NCBP2P52298 JPX-202ENST00000415215 475 ntTSL 57.17□□□□□ -1.267e-8■□□□□ 11.3
NCBP2P52298 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.63□□□□□ -1.357e-8■□□□□ 11.3
NCBP2P52298 JPX-203ENST00000453317 483 ntTSL 23.55□□□□□ -1.847e-8■□□□□ 11.3
NCBP2P52298 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.683e-7■□□□□ 11.3
NCBP2P52298 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.633e-7■□□□□ 11.3
NCBP2P52298 PRR14-207ENST00000565410 600 ntTSL 218.88■□□□□ 0.613e-7■□□□□ 11.3
NCBP2P52298 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.593e-7■□□□□ 11.3
NCBP2P52298 PRR14-205ENST00000563399 554 ntTSL 417.45■□□□□ 0.383e-7■□□□□ 11.3
NCBP2P52298 PRR14-206ENST00000564946 2117 ntTSL 217.33■□□□□ 0.373e-7■□□□□ 11.3
NCBP2P52298 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.343e-7■□□□□ 11.3
NCBP2P52298 PRR14-201ENST00000287463 2124 ntTSL 216.99■□□□□ 0.313e-7■□□□□ 11.3
NCBP2P52298 PRR14-211ENST00000568754 856 ntTSL 316.47■□□□□ 0.233e-7■□□□□ 11.3
NCBP2P52298 PRR14-212ENST00000569864 528 ntTSL 314.87□□□□□ -0.033e-7■□□□□ 11.3
NCBP2P52298 PRR14-204ENST00000563211 786 ntTSL 513.55□□□□□ -0.243e-7■□□□□ 11.3
NCBP2P52298 SUSD1-201ENST00000355396 2861 ntAPPRIS ALT2 TSL 210.78□□□□□ -0.683e-7■□□□□ 11.3
NCBP2P52298 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.032e-6■□□□□ 11.3
NCBP2P52298 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.149e-7■□□□□ 11.3
NCBP2P52298 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.98■□□□□ 0.633e-6■□□□□ 11.3
NCBP2P52298 IPO7-202ENST00000527431 607 ntTSL 418.58■□□□□ 0.569e-11■□□□□ 11.3
NCBP2P52298 RABL6-210ENST00000484471 2746 ntTSL 518.29■□□□□ 0.529e-7■□□□□ 11.3
NCBP2P52298 MAN2C1-223ENST00000565652 691 ntTSL 217.61■□□□□ 0.415e-8■□□□□ 11.3
NCBP2P52298 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.45e-8■□□□□ 11.3
NCBP2P52298 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.279e-7■□□□□ 11.3
NCBP2P52298 STRN4-205ENST00000593979 675 ntTSL 416.72■□□□□ 0.275e-8■□□□□ 11.3
NCBP2P52298 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.63■□□□□ 0.255e-8■□□□□ 11.3
NCBP2P52298 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.255e-8■□□□□ 11.3
NCBP2P52298 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.199e-7■□□□□ 11.3
NCBP2P52298 MAN2C1-234ENST00000566634 1540 ntTSL 515.99■□□□□ 0.155e-8■□□□□ 11.3
NCBP2P52298 MAN2C1-237ENST00000568374 569 ntTSL 415.32■□□□□ 0.045e-8■□□□□ 11.3
NCBP2P52298 MAN2C1-226ENST00000565784 571 ntTSL 415.32■□□□□ 0.045e-8■□□□□ 11.3
NCBP2P52298 MAN2C1-202ENST00000421803 1111 ntTSL 215.32■□□□□ 0.045e-8■□□□□ 11.3
NCBP2P52298 MAN2C1-214ENST00000563539 659 ntTSL 415.32■□□□□ 0.045e-8■□□□□ 11.3
NCBP2P52298 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.13■□□□□ 0.013e-6■□□□□ 11.3
NCBP2P52298 ZNF276-204ENST00000562530 1826 ntTSL 214.78□□□□□ -0.043e-6■□□□□ 11.3
NCBP2P52298 MAN2C1-206ENST00000562071 602 ntTSL 314.68□□□□□ -0.065e-8■□□□□ 11.3
NCBP2P52298 MAN2C1-232ENST00000566256 580 ntTSL 414.54□□□□□ -0.085e-8■□□□□ 11.3
NCBP2P52298 MAN2C1-203ENST00000561615 568 ntTSL 414.54□□□□□ -0.085e-8■□□□□ 11.3
NCBP2P52298 STRN4-203ENST00000435164 1551 ntTSL 213.67□□□□□ -0.225e-8■□□□□ 11.3
NCBP2P52298 MAN2C1-241ENST00000569355 867 ntTSL 513.66□□□□□ -0.225e-8■□□□□ 11.3
NCBP2P52298 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.09□□□□□ -0.315e-8■□□□□ 11.3
NCBP2P52298 STRN4-209ENST00000594704 913 ntTSL 513.09□□□□□ -0.315e-8■□□□□ 11.3
NCBP2P52298 MAN2C1-222ENST00000565534 1002 ntTSL 213□□□□□ -0.335e-8■□□□□ 11.3
NCBP2P52298 STRN4-220ENST00000600710 565 ntTSL 512.79□□□□□ -0.365e-8■□□□□ 11.3
NCBP2P52298 MAN2C1-212ENST00000563441 2664 ntTSL 1 (best)12.59□□□□□ -0.395e-8■□□□□ 11.3
NCBP2P52298 STRN4-212ENST00000596012 560 ntTSL 412.5□□□□□ -0.415e-8■□□□□ 11.3
NCBP2P52298 IPO7-206ENST00000533233 578 ntTSL 412.05□□□□□ -0.489e-11■□□□□ 11.3
NCBP2P52298 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC11.83□□□□□ -0.525e-8■□□□□ 11.3
NCBP2P52298 IPO7-201ENST00000379719 6191 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.539e-11■□□□□ 11.3
NCBP2P52298 MAN2C1-224ENST00000565683 3300 ntTSL 1 (best) BASIC11.55□□□□□ -0.565e-8■□□□□ 11.3
NCBP2P52298 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.575e-8■□□□□ 11.3
NCBP2P52298 ZNF276-206ENST00000563983 3403 ntTSL 211.19□□□□□ -0.623e-6■□□□□ 11.3
NCBP2P52298 FANCA-218ENST00000565582 812 ntTSL 310.82□□□□□ -0.681e-14■□□□□ 11.3
NCBP2P52298 PABPC1L-213ENST00000481196 488 ntTSL 59.33□□□□□ -0.922e-8■□□□□ 11.3
NCBP2P52298 TAOK1-205ENST00000583121 526 ntTSL 39.2□□□□□ -0.941e-12■□□□□ 11.3
NCBP2P52298 PICALM-215ENST00000531558 565 ntTSL 523.84■■□□□ 1.418e-30■□□□□ 11.3
NCBP2P52298 PICALM-218ENST00000532041 699 ntTSL 321■□□□□ 0.958e-30■□□□□ 11.3
NCBP2P52298 DCP1B-206ENST00000541700 948 ntTSL 519.77■□□□□ 0.762e-7■□□□□ 11.3
NCBP2P52298 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.162e-7■□□□□ 11.3
NCBP2P52298 DCP1B-207ENST00000543381 2073 ntTSL 516.07■□□□□ 0.162e-7■□□□□ 11.3
NCBP2P52298 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.34■□□□□ 0.052e-7■□□□□ 11.3
NCBP2P52298 DCP1B-204ENST00000537725 598 ntTSL 312.05□□□□□ -0.482e-7■□□□□ 11.3
NCBP2P52298 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.19□□□□□ -0.146e-8■□□□□ 11.3
NCBP2P52298 RAB5B-203ENST00000546810 589 ntTSL 212.41□□□□□ -0.426e-8■□□□□ 11.3
NCBP2P52298 RAB5B-204ENST00000548068 596 ntTSL 411.69□□□□□ -0.546e-8■□□□□ 11.3
NCBP2P52298 RAB5B-206ENST00000549505 3148 ntTSL 1 (best)9.4□□□□□ -0.916e-8■□□□□ 11.3
NCBP2P52298 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.156e-8■□□□□ 11.3
NCBP2P52298 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.326e-8■□□□□ 11.3
NCBP2P52298 RAB5B-209ENST00000551459 569 ntTSL 45.25□□□□□ -1.576e-8■□□□□ 11.3
NCBP2P52298 RAB5B-207ENST00000549915 494 ntTSL 43.45□□□□□ -1.866e-8■□□□□ 11.3
NCBP2P52298 TAF1D-205ENST00000526015 1735 ntTSL 1 (best)17.16■□□□□ 0.342e-20■□□□□ 11.3
NCBP2P52298 TAF1D-207ENST00000527169 1127 ntTSL 516.43■□□□□ 0.222e-20■□□□□ 11.3
NCBP2P52298 TAF1D-216ENST00000532235 334 ntTSL 314.79□□□□□ -0.042e-20■□□□□ 11.3
NCBP2P52298 TAF1D-217ENST00000532455 565 ntTSL 414.39□□□□□ -0.112e-20■□□□□ 11.3
NCBP2P52298 TAF1D-220ENST00000534770 737 ntTSL 314.28□□□□□ -0.122e-20■□□□□ 11.3
NCBP2P52298 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.132e-20■□□□□ 11.3
NCBP2P52298 TAF1D-211ENST00000529508 538 ntTSL 213.38□□□□□ -0.272e-20■□□□□ 11.3
NCBP2P52298 TAF1D-201ENST00000323981 2540 ntTSL 212.95□□□□□ -0.342e-20■□□□□ 11.3
NCBP2P52298 TAF1D-208ENST00000527690 335 ntTSL 32.18□□□□□ -2.062e-20■□□□□ 11.3
NCBP2P52298 RNF103-CHMP3-201ENST00000440757 805 ntTSL 317.06■□□□□ 0.321e-8■□□□□ 11.3
NCBP2P52298 CHMP3-207ENST00000485465 920 ntTSL 316.46■□□□□ 0.231e-8■□□□□ 11.3
NCBP2P52298 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.77□□□□□ -0.051e-8■□□□□ 11.3
NCBP2P52298 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.391e-8■□□□□ 11.3
NCBP2P52298 CHMP3-204ENST00000409727 1851 ntTSL 2 BASIC11.77□□□□□ -0.531e-8■□□□□ 11.3
NCBP2P52298 CHMP3-201ENST00000263856 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.541e-8■□□□□ 11.3
NCBP2P52298 CKLF-CMTM1-205ENST00000615332 395 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.949e-7■□□□□ 11.3
NCBP2P52298 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.499e-7■□□□□ 11.3
NCBP2P52298 ESRRA-206ENST00000539594 747 ntTSL 325.83■■□□□ 1.738e-8■□□□□ 11.3
NCBP2P52298 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.68e-8■□□□□ 11.3
NCBP2P52298 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.148e-8■□□□□ 11.3
NCBP2P52298 GPAT4-206ENST00000520258 870 ntTSL 220.79■□□□□ 0.928e-8■□□□□ 11.3
NCBP2P52298 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.698e-8■□□□□ 11.3
NCBP2P52298 GPAT4-205ENST00000520223 1101 ntTSL 218.65■□□□□ 0.588e-8■□□□□ 11.3
NCBP2P52298 TTLL5-216ENST00000556685 689 ntTSL 418.65■□□□□ 0.588e-8■□□□□ 11.3
NCBP2P52298 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.548e-8■□□□□ 11.3
NCBP2P52298 FOXRED2-205ENST00000423980 567 ntTSL 418.3■□□□□ 0.528e-8■□□□□ 11.3
NCBP2P52298 ESRRA-205ENST00000468670 742 ntTSL 218.18■□□□□ 0.58e-8■□□□□ 11.3
NCBP2P52298 NBPF1-206ENST00000599069 2752 ntTSL 1 (best)17.06■□□□□ 0.321e-12■□□□□ 11.3
NCBP2P52298 NBPF1-205ENST00000449853 2755 ntTSL 1 (best)17.03■□□□□ 0.321e-12■□□□□ 11.3
NCBP2P52298 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.01■□□□□ 0.158e-8■□□□□ 11.3
Retrieved 100 of 18,329 protein–RNA pairs in 102.5 ms