Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.7■□□□□ 0.1
HCFC1P51610 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.7■□□□□ 0.1
HCFC1P51610 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.7■□□□□ 0.1
HCFC1P51610 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC1P51610 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.7■□□□□ 0.1
HCFC1P51610 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.7■□□□□ 0.1
HCFC1P51610 AC079776.2-201ENST00000641154 1609 ntBASIC15.69■□□□□ 0.1
HCFC1P51610 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1P51610 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1P51610 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.69■□□□□ 0.1
HCFC1P51610 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1P51610 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.69■□□□□ 0.1
HCFC1P51610 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HCFC1P51610 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1P51610 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1P51610 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HCFC1P51610 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HCFC1P51610 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.69■□□□□ 0.1
HCFC1P51610 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1P51610 DNAJB3-202ENST00000449667 1266 ntBASIC15.69■□□□□ 0.1
HCFC1P51610 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1P51610 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1P51610 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.69■□□□□ 0.1
HCFC1P51610 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
HCFC1P51610 AC040169.1-201ENST00000565382 521 ntBASIC15.69■□□□□ 0.1
HCFC1P51610 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1P51610 AL499627.1-201ENST00000569373 2188 ntBASIC15.69■□□□□ 0.1
HCFC1P51610 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1P51610 LINC01126-201ENST00000623515 1646 ntBASIC15.69■□□□□ 0.1
HCFC1P51610 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1P51610 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1P51610 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1P51610 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.69■□□□□ 0.1
HCFC1P51610 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1P51610 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1P51610 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1P51610 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.69■□□□□ 0.1
HCFC1P51610 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC1P51610 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HCFC1P51610 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HCFC1P51610 CROCCP3-202ENST00000420820 1947 ntBASIC15.68■□□□□ 0.1
HCFC1P51610 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HCFC1P51610 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.68■□□□□ 0.1
HCFC1P51610 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.68■□□□□ 0.1
HCFC1P51610 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.68■□□□□ 0.1
HCFC1P51610 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.68■□□□□ 0.1
HCFC1P51610 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.68■□□□□ 0.1
HCFC1P51610 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.68■□□□□ 0.1
HCFC1P51610 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.68■□□□□ 0.1
HCFC1P51610 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.68■□□□□ 0.1
HCFC1P51610 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1P51610 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
HCFC1P51610 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1P51610 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1P51610 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.68■□□□□ 0.1
HCFC1P51610 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1P51610 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1P51610 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.68■□□□□ 0.1
HCFC1P51610 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.68■□□□□ 0.1
HCFC1P51610 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1P51610 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1P51610 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1P51610 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HCFC1P51610 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1P51610 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1P51610 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1P51610 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HCFC1P51610 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1P51610 KRT18P3-201ENST00000451602 1288 ntBASIC15.68■□□□□ 0.1
HCFC1P51610 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.68■□□□□ 0.1
HCFC1P51610 NKAPP1-205ENST00000585790 367 ntBASIC15.68■□□□□ 0.1
HCFC1P51610 AP001160.2-201ENST00000596071 487 ntBASIC15.68■□□□□ 0.1
HCFC1P51610 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC15.68■□□□□ 0.1
HCFC1P51610 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1P51610 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC1P51610 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
HCFC1P51610 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.68■□□□□ 0.1
HCFC1P51610 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.68■□□□□ 0.1
HCFC1P51610 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC1P51610 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC1P51610 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC1P51610 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC1P51610 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.67■□□□□ 0.1
HCFC1P51610 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.67■□□□□ 0.1
HCFC1P51610 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC1P51610 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.67■□□□□ 0.1
HCFC1P51610 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HCFC1P51610 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.67■□□□□ 0.1
HCFC1P51610 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC1P51610 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC1P51610 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC1P51610 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
HCFC1P51610 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC1P51610 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HCFC1P51610 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.67■□□□□ 0.1
HCFC1P51610 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC1P51610 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HCFC1P51610 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.67■□□□□ 0.1
HCFC1P51610 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC1P51610 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms