Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB28P51157 AC011840.4-201ENST00000578471 627 ntBASIC17.42■□□□□ 0.38
RAB28P51157 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.42■□□□□ 0.38
RAB28P51157 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.42■□□□□ 0.38
RAB28P51157 AC092329.2-201ENST00000598402 547 ntBASIC17.42■□□□□ 0.38
RAB28P51157 AL353801.3-201ENST00000609898 542 ntBASIC17.42■□□□□ 0.38
RAB28P51157 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB28P51157 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB28P51157 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB28P51157 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB28P51157 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB28P51157 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB28P51157 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB28P51157 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.42■□□□□ 0.38
RAB28P51157 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB28P51157 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB28P51157 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB28P51157 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RAB28P51157 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.42■□□□□ 0.38
RAB28P51157 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB28P51157 FLJ13224-201ENST00000313737 1514 ntBASIC17.42■□□□□ 0.38
RAB28P51157 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.41■□□□□ 0.38
RAB28P51157 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB28P51157 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB28P51157 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB28P51157 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB28P51157 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.41■□□□□ 0.38
RAB28P51157 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.41■□□□□ 0.38
RAB28P51157 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB28P51157 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB28P51157 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB28P51157 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB28P51157 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB28P51157 HCG4P8-203ENST00000443049 980 ntBASIC17.41■□□□□ 0.38
RAB28P51157 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB28P51157 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.41■□□□□ 0.38
RAB28P51157 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
RAB28P51157 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB28P51157 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB28P51157 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.41■□□□□ 0.38
RAB28P51157 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB28P51157 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RAB28P51157 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB28P51157 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB28P51157 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB28P51157 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB28P51157 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB28P51157 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB28P51157 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB28P51157 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RAB28P51157 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB28P51157 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB28P51157 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB28P51157 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB28P51157 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB28P51157 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB28P51157 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB28P51157 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB28P51157 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RAB28P51157 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.41■□□□□ 0.38
RAB28P51157 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB28P51157 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB28P51157 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.41■□□□□ 0.38
RAB28P51157 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB28P51157 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB28P51157 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB28P51157 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB28P51157 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RAB28P51157 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB28P51157 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB28P51157 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB28P51157 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB28P51157 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB28P51157 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB28P51157 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB28P51157 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB28P51157 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB28P51157 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.4■□□□□ 0.38
RAB28P51157 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB28P51157 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB28P51157 LINC00265-3P-201ENST00000447588 903 ntBASIC17.4■□□□□ 0.38
RAB28P51157 TOB2P1-201ENST00000469761 992 ntBASIC17.4■□□□□ 0.38
RAB28P51157 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.4■□□□□ 0.38
RAB28P51157 AC112698.1-201ENST00000510299 916 ntBASIC17.4■□□□□ 0.38
RAB28P51157 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.4■□□□□ 0.38
RAB28P51157 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB28P51157 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB28P51157 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB28P51157 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB28P51157 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB28P51157 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB28P51157 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
RAB28P51157 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB28P51157 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RAB28P51157 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB28P51157 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
RAB28P51157 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB28P51157 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RAB28P51157 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB28P51157 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms