Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.94■□□□□ 0.78
CPT1AP50416 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPT1AP50416 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.94■□□□□ 0.78
CPT1AP50416 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.94■□□□□ 0.78
CPT1AP50416 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.94■□□□□ 0.78
CPT1AP50416 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.94■□□□□ 0.78
CPT1AP50416 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CPT1AP50416 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPT1AP50416 AL022326.1-202ENST00000641533 845 ntBASIC19.94■□□□□ 0.78
CPT1AP50416 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CPT1AP50416 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CPT1AP50416 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CPT1AP50416 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPT1AP50416 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CPT1AP50416 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
CPT1AP50416 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CPT1AP50416 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPT1AP50416 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPT1AP50416 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPT1AP50416 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPT1AP50416 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPT1AP50416 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPT1AP50416 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPT1AP50416 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.93■□□□□ 0.78
CPT1AP50416 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPT1AP50416 PMPCAP1-201ENST00000508114 1576 ntBASIC19.93■□□□□ 0.78
CPT1AP50416 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.93■□□□□ 0.78
CPT1AP50416 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPT1AP50416 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.93■□□□□ 0.78
CPT1AP50416 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
CPT1AP50416 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.93■□□□□ 0.78
CPT1AP50416 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.93■□□□□ 0.78
CPT1AP50416 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.93■□□□□ 0.78
CPT1AP50416 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPT1AP50416 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CPT1AP50416 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPT1AP50416 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPT1AP50416 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPT1AP50416 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CPT1AP50416 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.93■□□□□ 0.78
CPT1AP50416 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPT1AP50416 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPT1AP50416 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPT1AP50416 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.93■□□□□ 0.78
CPT1AP50416 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPT1AP50416 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CPT1AP50416 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.92■□□□□ 0.78
CPT1AP50416 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CPT1AP50416 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.92■□□□□ 0.78
CPT1AP50416 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CPT1AP50416 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPT1AP50416 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPT1AP50416 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CPT1AP50416 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CPT1AP50416 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.92■□□□□ 0.78
CPT1AP50416 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.92■□□□□ 0.78
CPT1AP50416 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.92■□□□□ 0.78
CPT1AP50416 KRT18P3-201ENST00000451602 1288 ntBASIC19.92■□□□□ 0.78
CPT1AP50416 UNC93B6-202ENST00000528242 690 ntBASIC19.92■□□□□ 0.78
CPT1AP50416 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPT1AP50416 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.92■□□□□ 0.78
CPT1AP50416 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.92■□□□□ 0.78
CPT1AP50416 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPT1AP50416 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.92■□□□□ 0.78
CPT1AP50416 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.92■□□□□ 0.78
CPT1AP50416 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.92■□□□□ 0.78
CPT1AP50416 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CPT1AP50416 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CPT1AP50416 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPT1AP50416 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPT1AP50416 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPT1AP50416 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPT1AP50416 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPT1AP50416 AP002414.3-201ENST00000589352 1468 ntBASIC19.92■□□□□ 0.78
CPT1AP50416 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.92■□□□□ 0.78
CPT1AP50416 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.91■□□□□ 0.78
CPT1AP50416 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPT1AP50416 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPT1AP50416 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPT1AP50416 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPT1AP50416 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPT1AP50416 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPT1AP50416 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.91■□□□□ 0.78
CPT1AP50416 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.91■□□□□ 0.78
CPT1AP50416 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.91■□□□□ 0.78
CPT1AP50416 AC005104.2-201ENST00000427818 678 ntBASIC19.91■□□□□ 0.78
CPT1AP50416 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.91■□□□□ 0.78
CPT1AP50416 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.91■□□□□ 0.78
CPT1AP50416 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.91■□□□□ 0.78
CPT1AP50416 AC092183.1-201ENST00000469884 875 ntBASIC19.91■□□□□ 0.78
CPT1AP50416 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.91■□□□□ 0.78
CPT1AP50416 BX005266.1-201ENST00000473402 457 ntBASIC19.91■□□□□ 0.78
CPT1AP50416 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.91■□□□□ 0.78
CPT1AP50416 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.91■□□□□ 0.78
CPT1AP50416 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.91■□□□□ 0.78
CPT1AP50416 AC073592.4-201ENST00000623827 446 ntBASIC19.91■□□□□ 0.78
CPT1AP50416 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CPT1AP50416 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPT1AP50416 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPT1AP50416 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms