Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.79■□□□□ 0.44
SLC1A6P48664 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC1A6P48664 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A6P48664 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SLC1A6P48664 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
SLC1A6P48664 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A6P48664 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A6P48664 NKILA-202ENST00000614771 2598 ntBASIC17.78■□□□□ 0.44
SLC1A6P48664 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A6P48664 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A6P48664 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC1A6P48664 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.78■□□□□ 0.44
SLC1A6P48664 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A6P48664 MIR4674-201ENST00000582457 87 ntBASIC17.78■□□□□ 0.44
SLC1A6P48664 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC1A6P48664 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A6P48664 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC1A6P48664 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC1A6P48664 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC1A6P48664 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A6P48664 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A6P48664 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC1A6P48664 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC1A6P48664 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SLC1A6P48664 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A6P48664 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A6P48664 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC1A6P48664 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC1A6P48664 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A6P48664 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC1A6P48664 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A6P48664 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC1A6P48664 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A6P48664 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A6P48664 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SLC1A6P48664 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
SLC1A6P48664 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A6P48664 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A6P48664 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SLC1A6P48664 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A6P48664 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SLC1A6P48664 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A6P48664 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC1A6P48664 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A6P48664 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC1A6P48664 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SLC1A6P48664 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A6P48664 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A6P48664 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A6P48664 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SLC1A6P48664 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A6P48664 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A6P48664 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A6P48664 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A6P48664 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.77■□□□□ 0.44
SLC1A6P48664 KRT18P23-201ENST00000435622 1283 ntBASIC17.77■□□□□ 0.44
SLC1A6P48664 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.77■□□□□ 0.44
SLC1A6P48664 CA15P1-201ENST00000481698 905 ntBASIC17.77■□□□□ 0.44
SLC1A6P48664 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC1A6P48664 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.77■□□□□ 0.44
SLC1A6P48664 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A6P48664 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A6P48664 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SLC1A6P48664 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A6P48664 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A6P48664 AL138688.1-201ENST00000624851 1594 ntBASIC17.77■□□□□ 0.44
SLC1A6P48664 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC1A6P48664 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC1A6P48664 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
SLC1A6P48664 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.77■□□□□ 0.43
SLC1A6P48664 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SLC1A6P48664 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SLC1A6P48664 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SLC1A6P48664 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC1A6P48664 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC1A6P48664 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A6P48664 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A6P48664 AC011676.5-201ENST00000624864 2660 ntBASIC17.76■□□□□ 0.43
SLC1A6P48664 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A6P48664 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC1A6P48664 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC1A6P48664 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC1A6P48664 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC1A6P48664 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A6P48664 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A6P48664 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A6P48664 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A6P48664 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A6P48664 FAM197Y1-201ENST00000421178 764 ntBASIC17.76■□□□□ 0.43
SLC1A6P48664 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC1A6P48664 KRT18P6-201ENST00000555540 1265 ntBASIC17.76■□□□□ 0.43
SLC1A6P48664 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A6P48664 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC1A6P48664 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC1A6P48664 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC1A6P48664 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A6P48664 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A6P48664 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A6P48664 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC1A6P48664 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms